6-(Hydroxymethyl)-3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2,4,5-triol

Details

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Internal ID 5063bd02-a623-472e-9fed-d48a8fe5799c
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name 6-(hydroxymethyl)-3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2,4,5-triol
SMILES (Canonical) C(C1C(C(C(C(O1)O)OC2C(C(C(C(O2)CO)O)O)O)O)O)O
SMILES (Isomeric) C(C1C(C(C(C(O1)O)OC2C(C(C(C(O2)CO)O)O)O)O)O)O
InChI InChI=1S/C12H22O11/c13-1-3-6(16)8(18)10(11(20)21-3)23-12-9(19)7(17)5(15)4(2-14)22-12/h3-20H,1-2H2
InChI Key HIWPGCMGAMJNRG-UHFFFAOYSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C12H22O11
Molecular Weight 342.30 g/mol
Exact Mass 342.11621151 g/mol
Topological Polar Surface Area (TPSA) 190.00 Ų
XlogP -4.20
Atomic LogP (AlogP) -5.40
H-Bond Acceptor 11
H-Bond Donor 8
Rotatable Bonds 4

Synonyms

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6-(hydroxymethyl)-3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2,4,5-triol
a-Sophorose monohydrate
2-O-(alpha-D-Galactopyranosyl)-D-galactose
2-O-(beta-D-Mannopyranosyl)-D-mannose
2-O-(a-D-Galactopyranosyl)-D-glucopyranose
2-O-(b-D-Galactopyranosyl)-D-galactopyranose
50728-38-6
20429-79-2
7286-57-9
2-O-Hexopyranosylhexopyranose
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 6-(Hydroxymethyl)-3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.9680 96.80%
Caco-2 - 0.9372 93.72%
Blood Brain Barrier + 0.6750 67.50%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.7116 71.16%
OATP2B1 inhibitior - 0.8577 85.77%
OATP1B1 inhibitior + 0.9305 93.05%
OATP1B3 inhibitior + 0.9559 95.59%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.9628 96.28%
P-glycoprotein inhibitior - 0.9244 92.44%
P-glycoprotein substrate - 0.9882 98.82%
CYP3A4 substrate - 0.5768 57.68%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8414 84.14%
CYP3A4 inhibition - 0.9645 96.45%
CYP2C9 inhibition - 0.9376 93.76%
CYP2C19 inhibition - 0.9083 90.83%
CYP2D6 inhibition - 0.9399 93.99%
CYP1A2 inhibition - 0.9610 96.10%
CYP2C8 inhibition - 0.9465 94.65%
CYP inhibitory promiscuity - 0.8898 88.98%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6495 64.95%
Eye corrosion - 0.9920 99.20%
Eye irritation - 0.9606 96.06%
Skin irritation - 0.8992 89.92%
Skin corrosion - 0.9738 97.38%
Ames mutagenesis - 0.9000 90.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4395 43.95%
Micronuclear - 0.7941 79.41%
Hepatotoxicity - 0.9500 95.00%
skin sensitisation - 0.9455 94.55%
Respiratory toxicity - 0.7444 74.44%
Reproductive toxicity - 0.7444 74.44%
Mitochondrial toxicity - 0.8875 88.75%
Nephrotoxicity - 0.6146 61.46%
Acute Oral Toxicity (c) IV 0.6266 62.66%
Estrogen receptor binding - 0.7967 79.67%
Androgen receptor binding - 0.6322 63.22%
Thyroid receptor binding + 0.6797 67.97%
Glucocorticoid receptor binding - 0.7547 75.47%
Aromatase binding + 0.7583 75.83%
PPAR gamma + 0.5478 54.78%
Honey bee toxicity - 0.6605 66.05%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.7800 78.00%
Fish aquatic toxicity - 0.8800 88.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 92.43% 91.11%
CHEMBL226 P30542 Adenosine A1 receptor 88.31% 95.93%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 87.04% 96.09%
CHEMBL3589 P55263 Adenosine kinase 86.97% 98.05%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.83% 86.92%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rubus niveus

Cross-Links

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PubChem 4623424
LOTUS LTS0036063
wikiData Q82209370