methyl (2R,5R,6R)-5,6-dihydroxy-2-methyl-10-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,9-dioxatricyclo[4.4.0.02,4]dec-7-ene-7-carboxylate

Details

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Internal ID 3bc12be7-dd10-4f6b-8d55-0dc0ac7eed90
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name methyl (2R,5R,6R)-5,6-dihydroxy-2-methyl-10-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,9-dioxatricyclo[4.4.0.02,4]dec-7-ene-7-carboxylate
SMILES (Canonical) CC12C3C(OC=C(C3(C(C1O2)O)O)C(=O)OC)OC4C(C(C(C(O4)CO)O)O)O
SMILES (Isomeric) C[C@@]12C(O1)[C@H]([C@]3(C2C(OC=C3C(=O)OC)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O)O
InChI InChI=1S/C17H24O12/c1-16-10-15(28-14-9(21)8(20)7(19)6(3-18)27-14)26-4-5(13(23)25-2)17(10,24)11(22)12(16)29-16/h4,6-12,14-15,18-22,24H,3H2,1-2H3/t6-,7-,8+,9-,10?,11-,12?,14+,15?,16-,17+/m1/s1
InChI Key XZVXEPPPQBLGMQ-DMOZADJFSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C17H24O12
Molecular Weight 420.40 g/mol
Exact Mass 420.12677620 g/mol
Topological Polar Surface Area (TPSA) 188.00 Ų
XlogP -3.10
Atomic LogP (AlogP) -3.90
H-Bond Acceptor 12
H-Bond Donor 6
Rotatable Bonds 4

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (2R,5R,6R)-5,6-dihydroxy-2-methyl-10-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,9-dioxatricyclo[4.4.0.02,4]dec-7-ene-7-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6316 63.16%
Caco-2 - 0.8480 84.80%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.6887 68.87%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8021 80.21%
OATP1B3 inhibitior + 0.9495 94.95%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.8710 87.10%
P-glycoprotein inhibitior - 0.8411 84.11%
P-glycoprotein substrate - 0.7807 78.07%
CYP3A4 substrate + 0.6456 64.56%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8748 87.48%
CYP3A4 inhibition - 0.9146 91.46%
CYP2C9 inhibition - 0.9011 90.11%
CYP2C19 inhibition - 0.8566 85.66%
CYP2D6 inhibition - 0.9048 90.48%
CYP1A2 inhibition - 0.8833 88.33%
CYP2C8 inhibition - 0.6586 65.86%
CYP inhibitory promiscuity - 0.7602 76.02%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6775 67.75%
Eye corrosion - 0.9858 98.58%
Eye irritation - 0.9448 94.48%
Skin irritation - 0.7435 74.35%
Skin corrosion - 0.9419 94.19%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6329 63.29%
Micronuclear - 0.6141 61.41%
Hepatotoxicity - 0.8032 80.32%
skin sensitisation - 0.8210 82.10%
Respiratory toxicity - 0.5333 53.33%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity + 0.5489 54.89%
Acute Oral Toxicity (c) I 0.4185 41.85%
Estrogen receptor binding + 0.5770 57.70%
Androgen receptor binding + 0.5932 59.32%
Thyroid receptor binding + 0.5684 56.84%
Glucocorticoid receptor binding - 0.5838 58.38%
Aromatase binding + 0.6447 64.47%
PPAR gamma + 0.5745 57.45%
Honey bee toxicity - 0.8069 80.69%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7600 76.00%
Fish aquatic toxicity - 0.5165 51.65%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.15% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.81% 96.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 92.75% 96.61%
CHEMBL3401 O75469 Pregnane X receptor 90.47% 94.73%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.04% 94.45%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 87.33% 96.00%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.65% 86.92%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.46% 85.14%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 84.27% 91.24%
CHEMBL1293249 Q13887 Kruppel-like factor 5 82.40% 86.33%
CHEMBL3922 P50579 Methionine aminopeptidase 2 82.32% 97.28%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.18% 94.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.03% 99.17%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 81.99% 96.90%
CHEMBL2111367 P27986 PI3-kinase p110-alpha/p85-alpha 81.56% 94.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Phlomoides rotata
Sesamum indicum

Cross-Links

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PubChem 24893420
NPASS NPC219769