(2R,3S,4S,5R,6R)-2-[[(2R,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxymethyl]-6-[(2E,4S)-4-hydroxy-3,7-dimethylocta-2,6-dienoxy]oxane-3,4,5-triol

Details

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Internal ID 3f86f45f-6079-44bc-a897-4efcee7115c5
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3S,4S,5R,6R)-2-[[(2R,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxymethyl]-6-[(2E,4S)-4-hydroxy-3,7-dimethylocta-2,6-dienoxy]oxane-3,4,5-triol
SMILES (Canonical) CC(=CCC(C(=CCOC1C(C(C(C(O1)COC2C(C(C(O2)CO)O)O)O)O)O)C)O)C
SMILES (Isomeric) CC(=CC[C@@H](/C(=C/CO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO[C@H]2[C@@H]([C@H]([C@@H](O2)CO)O)O)O)O)O)/C)O)C
InChI InChI=1S/C21H36O11/c1-10(2)4-5-12(23)11(3)6-7-29-20-19(28)17(26)16(25)14(32-20)9-30-21-18(27)15(24)13(8-22)31-21/h4,6,12-28H,5,7-9H2,1-3H3/b11-6+/t12-,13-,14+,15-,16+,17-,18+,19+,20+,21+/m0/s1
InChI Key YURWKCHIKAZLIL-GOBCCTTRSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C21H36O11
Molecular Weight 464.50 g/mol
Exact Mass 464.22576196 g/mol
Topological Polar Surface Area (TPSA) 179.00 Ų
XlogP -1.30
Atomic LogP (AlogP) -2.07
H-Bond Acceptor 11
H-Bond Donor 7
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-[[(2R,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxymethyl]-6-[(2E,4S)-4-hydroxy-3,7-dimethylocta-2,6-dienoxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6201 62.01%
Caco-2 - 0.8867 88.67%
Blood Brain Barrier + 0.5500 55.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.7819 78.19%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8928 89.28%
OATP1B3 inhibitior + 0.9444 94.44%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.8250 82.50%
BSEP inhibitior - 0.8100 81.00%
P-glycoprotein inhibitior - 0.7821 78.21%
P-glycoprotein substrate - 0.9065 90.65%
CYP3A4 substrate + 0.5519 55.19%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8353 83.53%
CYP3A4 inhibition - 0.9680 96.80%
CYP2C9 inhibition - 0.8943 89.43%
CYP2C19 inhibition - 0.8738 87.38%
CYP2D6 inhibition - 0.9002 90.02%
CYP1A2 inhibition - 0.8709 87.09%
CYP2C8 inhibition - 0.8134 81.34%
CYP inhibitory promiscuity - 0.8926 89.26%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.7190 71.90%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.9609 96.09%
Skin irritation - 0.7990 79.90%
Skin corrosion - 0.9562 95.62%
Ames mutagenesis - 0.6854 68.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6596 65.96%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.6916 69.16%
skin sensitisation - 0.8735 87.35%
Respiratory toxicity - 0.7111 71.11%
Reproductive toxicity + 0.5222 52.22%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity + 0.4887 48.87%
Acute Oral Toxicity (c) III 0.5732 57.32%
Estrogen receptor binding + 0.5333 53.33%
Androgen receptor binding - 0.6687 66.87%
Thyroid receptor binding + 0.5615 56.15%
Glucocorticoid receptor binding - 0.6082 60.82%
Aromatase binding + 0.5975 59.75%
PPAR gamma + 0.6287 62.87%
Honey bee toxicity - 0.7776 77.76%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.9600 96.00%
Fish aquatic toxicity - 0.3639 36.39%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.53% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.64% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.14% 85.14%
CHEMBL3401 O75469 Pregnane X receptor 89.88% 94.73%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.71% 97.25%
CHEMBL2581 P07339 Cathepsin D 87.17% 98.95%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 86.42% 86.92%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.53% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rhodiola rosea

Cross-Links

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PubChem 101849417
LOTUS LTS0014966
wikiData Q105364483