[(2S,3R,4S,5R,6S)-4,5-dihydroxy-6-[(2R,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy-2-[(1S,2S,3'S,4S,4'S,5'R,6S,7S,8R,9S,10R,12S,13R,14R,16R)-3',10,16-trihydroxy-5',7,9,13-tetramethyl-4'-[(2S,3R,4R,5R,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxyoxan-3-yl]oxy-2-methyloxan-3-yl] acetate

Details

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Internal ID 734e5f79-adff-4d51-81f9-80a35e96ae9e
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name [(2S,3R,4S,5R,6S)-4,5-dihydroxy-6-[(2R,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy-2-[(1S,2S,3'S,4S,4'S,5'R,6S,7S,8R,9S,10R,12S,13R,14R,16R)-3',10,16-trihydroxy-5',7,9,13-tetramethyl-4'-[(2S,3R,4R,5R,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxyoxan-3-yl]oxy-2-methyloxan-3-yl] acetate
SMILES (Canonical) CC1COC2(C(C3C(O2)CC4C3(C(CC5C4CC=C6C5(C(CC(C6)O)OC7C(C(C(C(O7)CO)O)OC8C(C(C(CO8)O)O)O)OC9C(C(C(C(O9)C)OC(=O)C)O)O)C)O)C)C)C(C1OC1C(C(C(C(O1)C)O)O)O)O
SMILES (Isomeric) C[C@@H]1CO[C@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3([C@@H](C[C@H]5[C@H]4CC=C6[C@@]5([C@@H](C[C@@H](C6)O)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)O[C@H]9[C@@H]([C@@H]([C@H]([C@@H](O9)C)OC(=O)C)O)O)C)O)C)C)[C@H]([C@H]1O[C@H]1[C@@H]([C@@H]([C@H]([C@H](O1)C)O)O)O)O
InChI InChI=1S/C52H82O25/c1-17-15-68-52(45(66)41(17)74-47-39(64)36(61)33(58)19(3)69-47)18(2)32-28(77-52)12-25-24-9-8-22-10-23(55)11-31(50(22,6)26(24)13-30(57)51(25,32)7)73-49-44(76-48-40(65)37(62)42(20(4)70-48)71-21(5)54)43(35(60)29(14-53)72-49)75-46-38(63)34(59)27(56)16-67-46/h8,17-20,23-49,53,55-66H,9-16H2,1-7H3/t17-,18+,19-,20+,23-,24+,25+,26+,27-,28+,29-,30-,31-,32+,33+,34+,35-,36-,37+,38-,39-,40-,41+,42+,43+,44-,45+,46+,47+,48+,49+,50+,51-,52+/m1/s1
InChI Key FXYWXZPTWDOQFS-CFWAMMIOSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C52H82O25
Molecular Weight 1107.20 g/mol
Exact Mass 1106.51451810 g/mol
Topological Polar Surface Area (TPSA) 382.00 Ų
XlogP -3.30
Atomic LogP (AlogP) -3.84
H-Bond Acceptor 25
H-Bond Donor 13
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of [(2S,3R,4S,5R,6S)-4,5-dihydroxy-6-[(2R,3R,4S,5R,6R)-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy-2-[(1S,2S,3'S,4S,4'S,5'R,6S,7S,8R,9S,10R,12S,13R,14R,16R)-3',10,16-trihydroxy-5',7,9,13-tetramethyl-4'-[(2S,3R,4R,5R,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-14-yl]oxyoxan-3-yl]oxy-2-methyloxan-3-yl] acetate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8400 84.00%
Caco-2 - 0.8845 88.45%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.7657 76.57%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8318 83.18%
OATP1B3 inhibitior + 0.9033 90.33%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior + 0.8607 86.07%
P-glycoprotein inhibitior + 0.7460 74.60%
P-glycoprotein substrate + 0.7444 74.44%
CYP3A4 substrate + 0.7523 75.23%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8766 87.66%
CYP3A4 inhibition - 0.9070 90.70%
CYP2C9 inhibition - 0.9338 93.38%
CYP2C19 inhibition - 0.9305 93.05%
CYP2D6 inhibition - 0.9416 94.16%
CYP1A2 inhibition - 0.9168 91.68%
CYP2C8 inhibition + 0.7800 78.00%
CYP inhibitory promiscuity - 0.9305 93.05%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5542 55.42%
Eye corrosion - 0.9899 98.99%
Eye irritation - 0.9042 90.42%
Skin irritation - 0.5446 54.46%
Skin corrosion - 0.9440 94.40%
Ames mutagenesis - 0.5964 59.64%
Human Ether-a-go-go-Related Gene inhibition + 0.8120 81.20%
Micronuclear - 0.8100 81.00%
Hepatotoxicity - 0.7427 74.27%
skin sensitisation - 0.9004 90.04%
Respiratory toxicity + 0.6333 63.33%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.7889 78.89%
Acute Oral Toxicity (c) I 0.5504 55.04%
Estrogen receptor binding + 0.8243 82.43%
Androgen receptor binding + 0.7367 73.67%
Thyroid receptor binding + 0.5212 52.12%
Glucocorticoid receptor binding + 0.7462 74.62%
Aromatase binding + 0.6167 61.67%
PPAR gamma + 0.8109 81.09%
Honey bee toxicity - 0.5356 53.56%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity + 0.5745 57.45%
Fish aquatic toxicity + 0.9588 95.88%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.98% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.43% 91.11%
CHEMBL1293249 Q13887 Kruppel-like factor 5 96.69% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 92.70% 95.93%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.31% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.24% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.63% 94.00%
CHEMBL2581 P07339 Cathepsin D 89.04% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 88.27% 94.73%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.92% 97.09%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 87.27% 91.24%
CHEMBL218 P21554 Cannabinoid CB1 receptor 86.88% 96.61%
CHEMBL5255 O00206 Toll-like receptor 4 86.32% 92.50%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 85.72% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.50% 85.14%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.92% 92.94%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 84.46% 95.89%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 84.36% 96.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.24% 99.17%
CHEMBL340 P08684 Cytochrome P450 3A4 82.19% 91.19%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.19% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Brodiaea californica

Cross-Links

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PubChem 162965260
LOTUS LTS0058130
wikiData Q105004368