(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(1S,4S,5R)-3,3,5-trimethyl-4-[(3R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutyl]cyclohexyl]oxyoxane-3,4,5-triol

Details

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Internal ID 8a8b6686-ef97-4da5-bb6f-9e30ba7f51fa
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(1S,4S,5R)-3,3,5-trimethyl-4-[(3R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutyl]cyclohexyl]oxyoxane-3,4,5-triol
SMILES (Canonical) CC1CC(CC(C1CCC(C)OC2C(C(C(C(O2)CO)O)O)O)(C)C)OC3C(C(C(C(O3)CO)O)O)O
SMILES (Isomeric) C[C@@H]1C[C@@H](CC([C@H]1CC[C@@H](C)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)(C)C)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O
InChI InChI=1S/C25H46O12/c1-11-7-13(35-24-22(33)20(31)18(29)16(10-27)37-24)8-25(3,4)14(11)6-5-12(2)34-23-21(32)19(30)17(28)15(9-26)36-23/h11-24,26-33H,5-10H2,1-4H3/t11-,12-,13+,14+,15-,16-,17-,18-,19+,20+,21-,22-,23-,24-/m1/s1
InChI Key YSUUVSHCPOIJNV-PHXIZXPHSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C25H46O12
Molecular Weight 538.60 g/mol
Exact Mass 538.29892690 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP -0.40
Atomic LogP (AlogP) -1.77
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-[(1S,4S,5R)-3,3,5-trimethyl-4-[(3R)-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybutyl]cyclohexyl]oxyoxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8109 81.09%
Caco-2 - 0.8776 87.76%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.8396 83.96%
OATP2B1 inhibitior - 0.8617 86.17%
OATP1B1 inhibitior + 0.9135 91.35%
OATP1B3 inhibitior + 0.8466 84.66%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior - 0.9393 93.93%
P-glycoprotein inhibitior - 0.5816 58.16%
P-glycoprotein substrate - 0.6973 69.73%
CYP3A4 substrate + 0.6392 63.92%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8379 83.79%
CYP3A4 inhibition - 0.9513 95.13%
CYP2C9 inhibition - 0.8471 84.71%
CYP2C19 inhibition - 0.8999 89.99%
CYP2D6 inhibition - 0.9567 95.67%
CYP1A2 inhibition - 0.9234 92.34%
CYP2C8 inhibition - 0.8286 82.86%
CYP inhibitory promiscuity - 0.9636 96.36%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6807 68.07%
Eye corrosion - 0.9888 98.88%
Eye irritation - 0.9202 92.02%
Skin irritation - 0.8175 81.75%
Skin corrosion - 0.9679 96.79%
Ames mutagenesis - 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4162 41.62%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.7999 79.99%
skin sensitisation - 0.9161 91.61%
Respiratory toxicity - 0.6111 61.11%
Reproductive toxicity - 0.6889 68.89%
Mitochondrial toxicity - 0.7125 71.25%
Nephrotoxicity - 0.6543 65.43%
Acute Oral Toxicity (c) III 0.5481 54.81%
Estrogen receptor binding + 0.5527 55.27%
Androgen receptor binding - 0.5000 50.00%
Thyroid receptor binding + 0.5338 53.38%
Glucocorticoid receptor binding - 0.5302 53.02%
Aromatase binding + 0.6147 61.47%
PPAR gamma + 0.6029 60.29%
Honey bee toxicity - 0.7239 72.39%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity + 0.7964 79.64%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.33% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.30% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.97% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.30% 97.09%
CHEMBL2996 Q05655 Protein kinase C delta 91.69% 97.79%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 91.67% 92.86%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.30% 94.45%
CHEMBL226 P30542 Adenosine A1 receptor 89.13% 95.93%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 88.96% 96.21%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 88.19% 96.47%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.66% 85.14%
CHEMBL206 P03372 Estrogen receptor alpha 85.39% 97.64%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 82.89% 95.50%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 82.17% 96.95%
CHEMBL218 P21554 Cannabinoid CB1 receptor 82.11% 96.61%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Alangium platanifolium
Sedum sarmentosum

Cross-Links

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PubChem 10929570
LOTUS LTS0261004
wikiData Q104401628