3-hydroxy-6,7-dimethyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one

Details

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Internal ID 4ebf2fd1-02c5-42df-8335-73ed886d5745
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 3-hydroxy-6,7-dimethyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one
SMILES (Canonical) CC1=CC2=C(C=C1C)OC3=C(C2=O)C(=CC(=C3)O)OC4C(C(C(C(O4)CO)O)O)O
SMILES (Isomeric) CC1=CC2=C(C=C1C)OC3=C(C2=O)C(=CC(=C3)O)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O
InChI InChI=1S/C21H22O9/c1-8-3-11-12(4-9(8)2)28-13-5-10(23)6-14(16(13)17(11)24)29-21-20(27)19(26)18(25)15(7-22)30-21/h3-6,15,18-23,25-27H,7H2,1-2H3/t15-,18-,19+,20-,21-/m1/s1
InChI Key WMAOOSUVFZELAH-CMWLGVBASA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C21H22O9
Molecular Weight 418.40 g/mol
Exact Mass 418.12638228 g/mol
Topological Polar Surface Area (TPSA) 146.00 Ų
XlogP 1.20
Atomic LogP (AlogP) 0.45
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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3-hydroxy-6,7-dimethyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one
C17809
Q27155285
3-hydroxy-6,7-dimethyl-9-oxo-9H-xanthen-1-yl beta-D-glucopyranoside

2D Structure

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2D Structure of 3-hydroxy-6,7-dimethyl-1-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyxanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5767 57.67%
Caco-2 - 0.8155 81.55%
Blood Brain Barrier - 0.8250 82.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.6275 62.75%
OATP2B1 inhibitior - 0.5532 55.32%
OATP1B1 inhibitior + 0.9007 90.07%
OATP1B3 inhibitior + 0.9551 95.51%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior - 0.7192 71.92%
P-glycoprotein inhibitior - 0.7499 74.99%
P-glycoprotein substrate - 0.7734 77.34%
CYP3A4 substrate + 0.5875 58.75%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8471 84.71%
CYP3A4 inhibition - 0.9113 91.13%
CYP2C9 inhibition - 0.9460 94.60%
CYP2C19 inhibition - 0.9334 93.34%
CYP2D6 inhibition - 0.9445 94.45%
CYP1A2 inhibition - 0.8548 85.48%
CYP2C8 inhibition - 0.5635 56.35%
CYP inhibitory promiscuity - 0.7988 79.88%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7331 73.31%
Eye corrosion - 0.9923 99.23%
Eye irritation - 0.8820 88.20%
Skin irritation - 0.8302 83.02%
Skin corrosion - 0.9652 96.52%
Ames mutagenesis - 0.5154 51.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6660 66.60%
Micronuclear + 0.5933 59.33%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.9137 91.37%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.7111 71.11%
Mitochondrial toxicity - 0.6000 60.00%
Nephrotoxicity - 0.7602 76.02%
Acute Oral Toxicity (c) III 0.6457 64.57%
Estrogen receptor binding + 0.8284 82.84%
Androgen receptor binding + 0.6457 64.57%
Thyroid receptor binding + 0.5346 53.46%
Glucocorticoid receptor binding + 0.7540 75.40%
Aromatase binding + 0.6770 67.70%
PPAR gamma + 0.6409 64.09%
Honey bee toxicity - 0.7786 77.86%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity + 0.8234 82.34%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.26% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.64% 89.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 93.90% 96.21%
CHEMBL2581 P07339 Cathepsin D 93.57% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 93.57% 94.73%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 92.55% 94.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.29% 95.56%
CHEMBL220 P22303 Acetylcholinesterase 89.00% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 86.54% 99.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 86.30% 86.92%
CHEMBL3714130 P46095 G-protein coupled receptor 6 85.17% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.65% 86.33%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 82.63% 93.65%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 81.11% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Reynoutria multiflora
Swertia pseudochinensis

Cross-Links

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PubChem 5316774
NPASS NPC209907