[(5S,6R)-6-[(8S,9R,13R,14R,16R,17R)-3,16-dihydroxy-4,9,13,14-tetramethyl-11-oxo-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-7,8,12,15,16,17-hexahydro-6H-cyclopenta[a]phenanthren-17-yl]-5,6-dihydroxy-2-methylheptan-2-yl] acetate

Details

Top
Internal ID 52ef120b-c634-41e7-9381-d0f1953a3c13
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name [(5S,6R)-6-[(8S,9R,13R,14R,16R,17R)-3,16-dihydroxy-4,9,13,14-tetramethyl-11-oxo-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-7,8,12,15,16,17-hexahydro-6H-cyclopenta[a]phenanthren-17-yl]-5,6-dihydroxy-2-methylheptan-2-yl] acetate
SMILES (Canonical) CC1=C2CCC3C4(CC(C(C4(CC(=O)C3(C2=CC(=C1O)OC5C(C(C(C(O5)CO)O)O)O)C)C)C(C)(C(CCC(C)(C)OC(=O)C)O)O)O)C
SMILES (Isomeric) CC1=C2CC[C@H]3[C@]4(C[C@H]([C@@H]([C@]4(CC(=O)[C@]3(C2=CC(=C1O)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)C)C)[C@](C)([C@H](CCC(C)(C)OC(=O)C)O)O)O)C
InChI InChI=1S/C37H56O13/c1-17-19-9-10-24-34(5)14-21(40)31(37(8,47)25(41)11-12-33(3,4)50-18(2)39)35(34,6)15-26(42)36(24,7)20(19)13-22(27(17)43)48-32-30(46)29(45)28(44)23(16-38)49-32/h13,21,23-25,28-32,38,40-41,43-47H,9-12,14-16H2,1-8H3/t21-,23-,24+,25+,28-,29+,30-,31+,32-,34-,35-,36+,37+/m1/s1
InChI Key LGQOTCFFEQXKSO-WXEOTSLISA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C37H56O13
Molecular Weight 708.80 g/mol
Exact Mass 708.37209184 g/mol
Topological Polar Surface Area (TPSA) 224.00 Ų
XlogP 2.20
Atomic LogP (AlogP) 1.30
H-Bond Acceptor 13
H-Bond Donor 8
Rotatable Bonds 9

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of [(5S,6R)-6-[(8S,9R,13R,14R,16R,17R)-3,16-dihydroxy-4,9,13,14-tetramethyl-11-oxo-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-7,8,12,15,16,17-hexahydro-6H-cyclopenta[a]phenanthren-17-yl]-5,6-dihydroxy-2-methylheptan-2-yl] acetate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8454 84.54%
Caco-2 - 0.8560 85.60%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.7887 78.87%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8402 84.02%
OATP1B3 inhibitior + 0.8606 86.06%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7292 72.92%
BSEP inhibitior + 0.7198 71.98%
P-glycoprotein inhibitior + 0.7547 75.47%
P-glycoprotein substrate + 0.6218 62.18%
CYP3A4 substrate + 0.7279 72.79%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8697 86.97%
CYP3A4 inhibition - 0.7174 71.74%
CYP2C9 inhibition - 0.8160 81.60%
CYP2C19 inhibition - 0.8611 86.11%
CYP2D6 inhibition - 0.9490 94.90%
CYP1A2 inhibition - 0.5556 55.56%
CYP2C8 inhibition + 0.7096 70.96%
CYP inhibitory promiscuity - 0.9432 94.32%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9300 93.00%
Carcinogenicity (trinary) Non-required 0.7319 73.19%
Eye corrosion - 0.9928 99.28%
Eye irritation - 0.9113 91.13%
Skin irritation - 0.7128 71.28%
Skin corrosion - 0.9488 94.88%
Ames mutagenesis - 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6788 67.88%
Micronuclear - 0.8300 83.00%
Hepatotoxicity - 0.6348 63.48%
skin sensitisation - 0.9331 93.31%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8667 86.67%
Mitochondrial toxicity + 0.7000 70.00%
Nephrotoxicity - 0.6996 69.96%
Acute Oral Toxicity (c) III 0.4146 41.46%
Estrogen receptor binding + 0.7376 73.76%
Androgen receptor binding + 0.7452 74.52%
Thyroid receptor binding - 0.5170 51.70%
Glucocorticoid receptor binding + 0.7977 79.77%
Aromatase binding + 0.7173 71.73%
PPAR gamma + 0.7166 71.66%
Honey bee toxicity - 0.6949 69.49%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.9816 98.16%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.76% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 98.78% 85.14%
CHEMBL2581 P07339 Cathepsin D 97.78% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.82% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.78% 97.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 94.18% 92.94%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.34% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.22% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.00% 86.33%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 90.61% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.93% 94.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 89.88% 100.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 88.95% 96.21%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.72% 95.89%
CHEMBL3060 Q9Y345 Glycine transporter 2 88.36% 99.17%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.11% 95.56%
CHEMBL2069156 Q14145 Kelch-like ECH-associated protein 1 88.07% 82.38%
CHEMBL4581 P52732 Kinesin-like protein 1 87.94% 93.18%
CHEMBL3359 P21462 Formyl peptide receptor 1 87.20% 93.56%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 87.12% 100.00%
CHEMBL253 P34972 Cannabinoid CB2 receptor 86.53% 97.25%
CHEMBL5852 Q96P65 Pyroglutamylated RFamide peptide receptor 86.28% 85.00%
CHEMBL2996 Q05655 Protein kinase C delta 85.37% 97.79%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 84.91% 90.71%
CHEMBL5255 O00206 Toll-like receptor 4 84.78% 92.50%
CHEMBL220 P22303 Acetylcholinesterase 83.27% 94.45%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 82.24% 96.95%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.09% 91.24%
CHEMBL3401 O75469 Pregnane X receptor 81.02% 94.73%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 80.36% 91.07%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Cyclanthera pedata

Cross-Links

Top
PubChem 162972944
LOTUS LTS0146900
wikiData Q105151532