(2R)-2-[(1S)-1-[(1S,3R,8S,9S,10R,13S,14S,17R)-3-[(2R,3R,4S,5S,6R)-6-[[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-1-hydroxy-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]ethyl]-5-(hydroxymethyl)-4-methyl-2,3-dihydropyran-6-one

Details

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Internal ID 4e8908bb-81cd-4c99-8c84-3bc058642482
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Withanolides and derivatives > Withanolide glycosides and derivatives
IUPAC Name (2R)-2-[(1S)-1-[(1S,3R,8S,9S,10R,13S,14S,17R)-3-[(2R,3R,4S,5S,6R)-6-[[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-1-hydroxy-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]ethyl]-5-(hydroxymethyl)-4-methyl-2,3-dihydropyran-6-one
SMILES (Canonical) CC1=C(C(=O)OC(C1)C(C)C2CCC3C2(CCC4C3CC=C5C4(C(CC(C5)OC6C(C(C(C(O6)COC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)O)O)O)O)O)O)O)O)C)C)CO
SMILES (Isomeric) CC1=C(C(=O)O[C@H](C1)[C@@H](C)[C@H]2CC[C@@H]3[C@@]2(CC[C@H]4[C@H]3CC=C5[C@@]4([C@H](C[C@@H](C5)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O)O)O)O)O)O)O)O)C)C)CO
InChI InChI=1S/C46H72O20/c1-18-11-27(62-41(59)23(18)14-47)19(2)24-7-8-25-22-6-5-20-12-21(13-31(50)46(20,4)26(22)9-10-45(24,25)3)61-43-37(56)35(54)33(52)30(65-43)17-60-42-39(58)36(55)40(29(16-49)64-42)66-44-38(57)34(53)32(51)28(15-48)63-44/h5,19,21-22,24-40,42-44,47-58H,6-17H2,1-4H3/t19-,21+,22-,24+,25-,26-,27+,28+,29+,30+,31-,32+,33+,34-,35-,36+,37+,38+,39+,40+,42+,43+,44-,45+,46-/m0/s1
InChI Key JWDQOQNZKABFDG-KCZQQSFZSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C46H72O20
Molecular Weight 945.00 g/mol
Exact Mass 944.46169468 g/mol
Topological Polar Surface Area (TPSA) 324.00 Ų
XlogP -1.20
Atomic LogP (AlogP) -2.37
H-Bond Acceptor 20
H-Bond Donor 12
Rotatable Bonds 12

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R)-2-[(1S)-1-[(1S,3R,8S,9S,10R,13S,14S,17R)-3-[(2R,3R,4S,5S,6R)-6-[[(2R,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-1-hydroxy-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-17-yl]ethyl]-5-(hydroxymethyl)-4-methyl-2,3-dihydropyran-6-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7838 78.38%
Caco-2 - 0.8799 87.99%
Blood Brain Barrier - 0.6250 62.50%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.8076 80.76%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8427 84.27%
OATP1B3 inhibitior - 0.2313 23.13%
MATE1 inhibitior - 0.9412 94.12%
OCT2 inhibitior - 0.6776 67.76%
BSEP inhibitior + 0.9385 93.85%
P-glycoprotein inhibitior + 0.7391 73.91%
P-glycoprotein substrate + 0.6452 64.52%
CYP3A4 substrate + 0.7582 75.82%
CYP2C9 substrate - 0.8046 80.46%
CYP2D6 substrate - 0.8853 88.53%
CYP3A4 inhibition - 0.9495 94.95%
CYP2C9 inhibition - 0.9335 93.35%
CYP2C19 inhibition - 0.9392 93.92%
CYP2D6 inhibition - 0.9467 94.67%
CYP1A2 inhibition - 0.9243 92.43%
CYP2C8 inhibition + 0.6997 69.97%
CYP inhibitory promiscuity - 0.9590 95.90%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6109 61.09%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9089 90.89%
Skin irritation + 0.5259 52.59%
Skin corrosion - 0.9457 94.57%
Ames mutagenesis - 0.7700 77.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8414 84.14%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.7158 71.58%
skin sensitisation - 0.9254 92.54%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.6366 63.66%
Acute Oral Toxicity (c) III 0.4565 45.65%
Estrogen receptor binding + 0.8441 84.41%
Androgen receptor binding + 0.7602 76.02%
Thyroid receptor binding - 0.5158 51.58%
Glucocorticoid receptor binding + 0.7258 72.58%
Aromatase binding + 0.7006 70.06%
PPAR gamma + 0.7992 79.92%
Honey bee toxicity - 0.6421 64.21%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.5700 57.00%
Fish aquatic toxicity + 0.9296 92.96%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.43% 91.11%
CHEMBL1937 Q92769 Histone deacetylase 2 95.15% 94.75%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.92% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 94.48% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.86% 97.09%
CHEMBL5103 Q969S8 Histone deacetylase 10 93.24% 90.08%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.42% 97.25%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.39% 95.56%
CHEMBL1871 P10275 Androgen Receptor 91.95% 96.43%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 91.18% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 90.82% 89.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 90.63% 93.04%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.48% 100.00%
CHEMBL2581 P07339 Cathepsin D 90.36% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.64% 94.00%
CHEMBL325 Q13547 Histone deacetylase 1 89.23% 95.92%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.86% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.51% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.30% 99.23%
CHEMBL3401 O75469 Pregnane X receptor 85.36% 94.73%
CHEMBL5028 O14672 ADAM10 85.32% 97.50%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.85% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 83.08% 92.50%
CHEMBL3359 P21462 Formyl peptide receptor 1 82.38% 93.56%
CHEMBL3310 Q96DB2 Histone deacetylase 11 82.16% 88.56%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 82.14% 96.38%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 81.13% 97.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Withania somnifera

Cross-Links

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PubChem 163192113
LOTUS LTS0013374
wikiData Q105136109