(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,16S,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5R,6R)-4-[(2S,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one

Details

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Internal ID 3aa828bd-3398-4db5-bdca-446db825ecbc
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,16S,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5R,6R)-4-[(2S,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(C(=O)CC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)OC9C(C(C(C(O9)CO)OC2C(C(C(C(O2)C)O)O)O)O)O)OC2C(C(C(C(O2)CO)O)O)O)O)O)C)C)C)OC1
SMILES (Isomeric) C[C@@H]1CC[C@@]2([C@H]([C@H]3[C@@H](O2)C[C@@H]4[C@@]3(C(=O)C[C@H]5[C@H]4CC[C@@H]6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O[C@H]2[C@@H]([C@@H]([C@H]([C@@H](O2)C)O)O)O)O)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O)C)C)C)OC1
InChI InChI=1S/C57H92O28/c1-20-8-11-57(74-19-20)21(2)34-28(85-57)13-27-25-7-6-23-12-24(9-10-55(23,4)26(25)14-33(62)56(27,34)5)76-51-44(72)40(68)47(32(18-61)79-51)82-54-49(84-52-43(71)39(67)36(64)29(15-58)77-52)48(37(65)30(16-59)78-54)83-53-45(73)41(69)46(31(17-60)80-53)81-50-42(70)38(66)35(63)22(3)75-50/h20-32,34-54,58-61,63-73H,6-19H2,1-5H3/t20-,21+,22+,23+,24+,25-,26+,27+,28+,29-,30-,31-,32-,34+,35+,36-,37-,38-,39+,40-,41-,42-,43-,44-,45-,46-,47+,48+,49-,50+,51-,52+,53+,54+,55+,56-,57-/m1/s1
InChI Key YFEZIHVOGMPYOV-USLGHZIRSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C57H92O28
Molecular Weight 1225.30 g/mol
Exact Mass 1224.57751227 g/mol
Topological Polar Surface Area (TPSA) 431.00 Ų
XlogP -3.70
Atomic LogP (AlogP) -4.88
H-Bond Acceptor 28
H-Bond Donor 15
Rotatable Bonds 14

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,16S,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5R,6R)-4-[(2S,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5000 50.00%
Caco-2 - 0.8735 87.35%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.7795 77.95%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8768 87.68%
OATP1B3 inhibitior + 0.9395 93.95%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5500 55.00%
BSEP inhibitior + 0.8975 89.75%
P-glycoprotein inhibitior + 0.7423 74.23%
P-glycoprotein substrate - 0.5135 51.35%
CYP3A4 substrate + 0.7396 73.96%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8483 84.83%
CYP3A4 inhibition - 0.9505 95.05%
CYP2C9 inhibition - 0.9148 91.48%
CYP2C19 inhibition - 0.8948 89.48%
CYP2D6 inhibition - 0.9589 95.89%
CYP1A2 inhibition - 0.9134 91.34%
CYP2C8 inhibition + 0.6430 64.30%
CYP inhibitory promiscuity - 0.9439 94.39%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6468 64.68%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.9013 90.13%
Skin irritation - 0.6781 67.81%
Skin corrosion - 0.9501 95.01%
Ames mutagenesis - 0.8154 81.54%
Human Ether-a-go-go-Related Gene inhibition + 0.8157 81.57%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.9000 90.00%
skin sensitisation - 0.9458 94.58%
Respiratory toxicity + 0.8222 82.22%
Reproductive toxicity + 0.7000 70.00%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.7216 72.16%
Acute Oral Toxicity (c) I 0.7157 71.57%
Estrogen receptor binding + 0.8669 86.69%
Androgen receptor binding + 0.7329 73.29%
Thyroid receptor binding + 0.5479 54.79%
Glucocorticoid receptor binding + 0.7048 70.48%
Aromatase binding + 0.6449 64.49%
PPAR gamma + 0.7989 79.89%
Honey bee toxicity - 0.5403 54.03%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.8713 87.13%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.13% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.63% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.44% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.24% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.62% 86.33%
CHEMBL5255 O00206 Toll-like receptor 4 87.55% 92.50%
CHEMBL237 P41145 Kappa opioid receptor 86.48% 98.10%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 86.19% 91.24%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.62% 94.45%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.32% 89.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.86% 92.94%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 83.58% 93.04%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 83.09% 95.50%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 82.74% 94.00%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 82.66% 97.50%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.66% 100.00%
CHEMBL1937 Q92769 Histone deacetylase 2 80.99% 94.75%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.17% 95.83%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Camassia leichtlinii
Lonicera japonica

Cross-Links

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PubChem 10606686
LOTUS LTS0238112
wikiData Q103817679