(2S,3R,4S,5S,6R)-2-[(3R,4R,5R,6S)-6-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl)oxyoxan-3-yl]oxy-4,5-dihydroxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 63aa0b34-f47c-4cfa-9908-3063a78226b1
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4S,5S,6R)-2-[(3R,4R,5R,6S)-6-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl)oxyoxan-3-yl]oxy-4,5-dihydroxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CCC6C5(CCC(C6)OC7C(C(C(C(O7)CO)O)O)OC8C(C(C(CO8)OC9C(C(C(C(O9)CO)O)O)O)O)O)C)C)C)OC1
SMILES (Isomeric) CC1CCC2(C(C3C(O2)CC4C3(CCC5C4CCC6C5(CCC(C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O[C@H]9[C@@H]([C@H]([C@@H]([C@H](O9)CO)O)O)O)O)O)C)C)C)OC1
InChI InChI=1S/C44H72O17/c1-19-7-12-44(55-17-19)20(2)30-26(61-44)14-25-23-6-5-21-13-22(8-10-42(21,3)24(23)9-11-43(25,30)4)56-41-38(35(51)32(48)28(16-46)58-41)60-39-36(52)33(49)29(18-54-39)59-40-37(53)34(50)31(47)27(15-45)57-40/h19-41,45-53H,5-18H2,1-4H3/t19?,20?,21?,22?,23?,24?,25?,26?,27-,28-,29-,30?,31-,32-,33+,34+,35+,36-,37-,38-,39+,40+,41-,42?,43?,44?/m1/s1
InChI Key ISVVLDBHDVLEOH-ORMIVFPWSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C44H72O17
Molecular Weight 873.00 g/mol
Exact Mass 872.47695082 g/mol
Topological Polar Surface Area (TPSA) 256.00 Ų
XlogP 1.80
Atomic LogP (AlogP) -0.09
H-Bond Acceptor 17
H-Bond Donor 9
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4S,5S,6R)-2-[(3R,4R,5R,6S)-6-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-2-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl)oxyoxan-3-yl]oxy-4,5-dihydroxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5917 59.17%
Caco-2 - 0.8834 88.34%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.6898 68.98%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9110 91.10%
OATP1B3 inhibitior + 0.9448 94.48%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.5750 57.50%
BSEP inhibitior - 0.4732 47.32%
P-glycoprotein inhibitior + 0.7263 72.63%
P-glycoprotein substrate - 0.6383 63.83%
CYP3A4 substrate + 0.7529 75.29%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9611 96.11%
CYP2C9 inhibition - 0.9091 90.91%
CYP2C19 inhibition - 0.8819 88.19%
CYP2D6 inhibition - 0.9566 95.66%
CYP1A2 inhibition - 0.9089 90.89%
CYP2C8 inhibition + 0.6708 67.08%
CYP inhibitory promiscuity - 0.9291 92.91%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6271 62.71%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9118 91.18%
Skin irritation - 0.7119 71.19%
Skin corrosion - 0.9532 95.32%
Ames mutagenesis - 0.7254 72.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7876 78.76%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.9000 90.00%
skin sensitisation - 0.9466 94.66%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.7911 79.11%
Acute Oral Toxicity (c) I 0.7761 77.61%
Estrogen receptor binding + 0.8138 81.38%
Androgen receptor binding + 0.6814 68.14%
Thyroid receptor binding - 0.5848 58.48%
Glucocorticoid receptor binding - 0.5000 50.00%
Aromatase binding + 0.6472 64.72%
PPAR gamma + 0.7163 71.63%
Honey bee toxicity - 0.5086 50.86%
Biodegradation - 0.8250 82.50%
Crustacea aquatic toxicity - 0.5000 50.00%
Fish aquatic toxicity + 0.8210 82.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.36% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.87% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.90% 97.09%
CHEMBL233 P35372 Mu opioid receptor 93.91% 97.93%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 93.09% 95.58%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 93.01% 96.21%
CHEMBL237 P41145 Kappa opioid receptor 92.75% 98.10%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.50% 94.45%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 91.61% 89.05%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.20% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 91.18% 95.50%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 90.66% 93.10%
CHEMBL218 P21554 Cannabinoid CB1 receptor 89.27% 96.61%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 88.29% 97.86%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 87.96% 97.31%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 87.42% 96.77%
CHEMBL5255 O00206 Toll-like receptor 4 87.41% 92.50%
CHEMBL241 Q14432 Phosphodiesterase 3A 86.69% 92.94%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 85.97% 97.50%
CHEMBL226 P30542 Adenosine A1 receptor 85.94% 95.93%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 85.23% 95.36%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 84.65% 92.86%
CHEMBL2996 Q05655 Protein kinase C delta 84.62% 97.79%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 84.17% 100.00%
CHEMBL204 P00734 Thrombin 83.78% 96.01%
CHEMBL2095194 P08709 Coagulation factor VII/tissue factor 83.46% 99.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.30% 95.89%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.64% 95.89%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 82.34% 96.67%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.10% 89.00%
CHEMBL3922 P50579 Methionine aminopeptidase 2 81.83% 97.28%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.76% 91.24%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 81.18% 96.95%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 81.04% 100.00%
CHEMBL259 P32245 Melanocortin receptor 4 80.57% 95.38%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Asparagus officinalis

Cross-Links

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PubChem 5320480
NPASS NPC194741