(3S,8S,9R,10R,13R,14S,17R)-17-[(2R,5R)-5-hydroxy-6-methyl-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxyheptan-2-yl]-4,4,9,13,14-pentamethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,7,8,10,12,15,16,17-decahydrocyclopenta[a]phenanthren-11-one

Details

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Internal ID f938aa9c-ec18-4025-8347-3866868928ca
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name (3S,8S,9R,10R,13R,14S,17R)-17-[(2R,5R)-5-hydroxy-6-methyl-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxyheptan-2-yl]-4,4,9,13,14-pentamethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,7,8,10,12,15,16,17-decahydrocyclopenta[a]phenanthren-11-one
SMILES (Canonical) CC(CCC(C(C)(C)OC1C(C(C(C(O1)COC2C(C(C(C(O2)CO)O)O)O)O)O)O)O)C3CCC4(C3(CC(=O)C5(C4CC=C6C5CCC(C6(C)C)OC7C(C(C(C(O7)CO)O)O)O)C)C)C
SMILES (Isomeric) C[C@H](CC[C@H](C(C)(C)O[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O)O)O)[C@H]3CC[C@@]4([C@@]3(CC(=O)[C@@]5([C@H]4CC=C6[C@H]5CC[C@@H](C6(C)C)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O)C)C)C
InChI InChI=1S/C48H80O19/c1-21(9-13-29(51)45(4,5)67-43-40(61)37(58)34(55)27(65-43)20-62-41-38(59)35(56)32(53)25(18-49)63-41)22-15-16-46(6)28-12-10-23-24(48(28,8)30(52)17-47(22,46)7)11-14-31(44(23,2)3)66-42-39(60)36(57)33(54)26(19-50)64-42/h10,21-22,24-29,31-43,49-51,53-61H,9,11-20H2,1-8H3/t21-,22-,24-,25-,26-,27-,28+,29-,31+,32-,33-,34-,35+,36+,37+,38-,39-,40-,41-,42+,43+,46+,47-,48+/m1/s1
InChI Key IJNWRPOFXBROQB-GDOAMJOQSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C48H80O19
Molecular Weight 961.10 g/mol
Exact Mass 960.52938032 g/mol
Topological Polar Surface Area (TPSA) 315.00 Ų
XlogP -0.30
Atomic LogP (AlogP) -0.85
H-Bond Acceptor 19
H-Bond Donor 12
Rotatable Bonds 14

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (3S,8S,9R,10R,13R,14S,17R)-17-[(2R,5R)-5-hydroxy-6-methyl-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxymethyl]oxan-2-yl]oxyheptan-2-yl]-4,4,9,13,14-pentamethyl-3-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1,2,3,7,8,10,12,15,16,17-decahydrocyclopenta[a]phenanthren-11-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8258 82.58%
Caco-2 - 0.8832 88.32%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.8432 84.32%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8362 83.62%
OATP1B3 inhibitior - 0.3515 35.15%
MATE1 inhibitior - 0.9812 98.12%
OCT2 inhibitior - 0.6526 65.26%
BSEP inhibitior + 0.7964 79.64%
P-glycoprotein inhibitior + 0.7510 75.10%
P-glycoprotein substrate + 0.5127 51.27%
CYP3A4 substrate + 0.7291 72.91%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8581 85.81%
CYP3A4 inhibition - 0.9446 94.46%
CYP2C9 inhibition - 0.8769 87.69%
CYP2C19 inhibition - 0.9253 92.53%
CYP2D6 inhibition - 0.9396 93.96%
CYP1A2 inhibition - 0.9147 91.47%
CYP2C8 inhibition + 0.6175 61.75%
CYP inhibitory promiscuity - 0.9524 95.24%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6051 60.51%
Eye corrosion - 0.9903 99.03%
Eye irritation - 0.9042 90.42%
Skin irritation - 0.5396 53.96%
Skin corrosion - 0.9439 94.39%
Ames mutagenesis - 0.8000 80.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7827 78.27%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.5933 59.33%
skin sensitisation - 0.9029 90.29%
Respiratory toxicity + 0.5889 58.89%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity - 0.5750 57.50%
Nephrotoxicity - 0.6099 60.99%
Acute Oral Toxicity (c) III 0.6642 66.42%
Estrogen receptor binding + 0.8255 82.55%
Androgen receptor binding + 0.7645 76.45%
Thyroid receptor binding + 0.5157 51.57%
Glucocorticoid receptor binding + 0.7548 75.48%
Aromatase binding + 0.6789 67.89%
PPAR gamma + 0.8023 80.23%
Honey bee toxicity - 0.7057 70.57%
Biodegradation - 0.6500 65.00%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.9477 94.77%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 97.97% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.81% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 97.80% 97.25%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.19% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.64% 97.09%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 91.12% 93.04%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.81% 96.61%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 90.15% 96.21%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.75% 94.45%
CHEMBL2996 Q05655 Protein kinase C delta 89.08% 97.79%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.28% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.10% 95.56%
CHEMBL220 P22303 Acetylcholinesterase 87.48% 94.45%
CHEMBL4581 P52732 Kinesin-like protein 1 86.91% 93.18%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 84.83% 100.00%
CHEMBL1937 Q92769 Histone deacetylase 2 84.69% 94.75%
CHEMBL3359 P21462 Formyl peptide receptor 1 84.66% 93.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.64% 94.00%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.25% 97.14%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.67% 92.62%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.66% 95.89%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.46% 91.07%
CHEMBL1994 P08235 Mineralocorticoid receptor 83.14% 100.00%
CHEMBL5255 O00206 Toll-like receptor 4 82.94% 92.50%
CHEMBL4227 P25090 Lipoxin A4 receptor 82.46% 100.00%
CHEMBL4208 P20618 Proteasome component C5 81.19% 90.00%
CHEMBL3401 O75469 Pregnane X receptor 80.20% 94.73%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 80.05% 99.23%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Bryonia cretica

Cross-Links

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PubChem 15143904
LOTUS LTS0150951
wikiData Q104393323