(2S,3R,4S,5S,6R)-2-[(2S,3R,4S,5R,6R)-2-[(2R,3R,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-[(1R,4R,5'S,6R,7S,8R,9R,12R,13R,16S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosa-2,18-diene-6,2'-oxane]-16-yl]oxyoxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 616e835b-7e23-4b0d-a208-bd367f6b1543
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4S,5S,6R)-2-[(2S,3R,4S,5R,6R)-2-[(2R,3R,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-[(1R,4R,5'S,6R,7S,8R,9R,12R,13R,16S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosa-2,18-diene-6,2'-oxane]-16-yl]oxyoxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3C(O2)C=C4C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)CO)OC8C(C(C(C(O8)CO)O)OC9C(C(C(CO9)O)O)O)OC2C(C(C(C(O2)CO)O)O)O)O)O)C)C)C)OC1
SMILES (Isomeric) C[C@H]1CC[C@@]2([C@H]([C@H]3[C@H](O2)C=C4[C@@]3(CC[C@@H]5[C@H]4CC=C6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@H]([C@H](O7)CO)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O)O[C@H]9[C@@H]([C@H]([C@@H](CO9)O)O)O)O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O)C)C)C)OC1
InChI InChI=1S/C50H78O22/c1-20-7-12-50(64-18-20)21(2)32-28(72-50)14-26-24-6-5-22-13-23(8-10-48(22,3)25(24)9-11-49(26,32)4)65-45-40(62)37(59)41(31(17-53)68-45)69-47-43(71-46-39(61)36(58)34(56)29(15-51)66-46)42(35(57)30(16-52)67-47)70-44-38(60)33(55)27(54)19-63-44/h5,14,20-21,23-25,27-47,51-62H,6-13,15-19H2,1-4H3/t20-,21-,23-,24+,25+,27+,28+,29+,30+,31+,32-,33-,34+,35+,36-,37+,38+,39+,40+,41-,42-,43+,44-,45+,46-,47-,48-,49-,50+/m0/s1
InChI Key XFCIDVONTUVXAD-AUHMSCJUSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C50H78O22
Molecular Weight 1031.10 g/mol
Exact Mass 1030.49847411 g/mol
Topological Polar Surface Area (TPSA) 335.00 Ų
XlogP -1.90

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4S,5S,6R)-2-[(2S,3R,4S,5R,6R)-2-[(2R,3R,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-[(1R,4R,5'S,6R,7S,8R,9R,12R,13R,16S)-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosa-2,18-diene-6,2'-oxane]-16-yl]oxyoxan-3-yl]oxy-5-hydroxy-6-(hydroxymethyl)-4-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
No predicted properties yet!

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.93% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.71% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 96.83% 95.93%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.81% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.72% 97.09%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 91.27% 89.05%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.57% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 90.37% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.09% 95.50%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.89% 94.45%
CHEMBL2581 P07339 Cathepsin D 86.59% 98.95%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 86.28% 86.92%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.16% 89.00%
CHEMBL5255 O00206 Toll-like receptor 4 85.52% 92.50%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.08% 86.33%
CHEMBL218 P21554 Cannabinoid CB1 receptor 82.57% 96.61%
CHEMBL233 P35372 Mu opioid receptor 82.57% 97.93%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 82.50% 96.77%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.11% 85.14%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.96% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.74% 94.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 81.04% 95.89%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.48% 91.24%
CHEMBL325 Q13547 Histone deacetylase 1 80.20% 95.92%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 80.16% 100.00%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 80.02% 94.08%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Polygonatum odoratum

Cross-Links

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PubChem 162965607
LOTUS LTS0079701
wikiData Q105326925