4'-O-beta-D-Glucopyranosylgentiopicroside

Details

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Internal ID bb728dbd-2287-476b-b454-602f25a69203
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > O-glycosyl compounds
IUPAC Name (3S,4R)-3-[(2S,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4-ethenyl-4,6-dihydro-3H-pyrano[3,4-c]pyran-8-one
SMILES (Canonical) C=CC1C(OC=C2C1=CCOC2=O)OC3C(C(C(C(O3)CO)OC4C(C(C(C(O4)CO)O)O)O)O)O
SMILES (Isomeric) C=C[C@H]1[C@@H](OC=C2C1=CCOC2=O)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O)O
InChI InChI=1S/C22H30O14/c1-2-8-9-3-4-31-19(30)10(9)7-32-20(8)36-22-17(29)15(27)18(12(6-24)34-22)35-21-16(28)14(26)13(25)11(5-23)33-21/h2-3,7-8,11-18,20-29H,1,4-6H2/t8-,11-,12-,13-,14+,15-,16-,17-,18-,20+,21+,22+/m1/s1
InChI Key MEDNMSXQVOHQIF-WMYYSYIVSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C22H30O14
Molecular Weight 518.50 g/mol
Exact Mass 518.16355563 g/mol
Topological Polar Surface Area (TPSA) 214.00 Ų
XlogP -3.40
Atomic LogP (AlogP) -3.85
H-Bond Acceptor 14
H-Bond Donor 7
Rotatable Bonds 7

Synonyms

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(3S,4R)-3-[(2S,3R,4R,5S,6R)-3,4-dihydroxy-6-(hydroxymethyl)-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4-ethenyl-4,6-dihydro-3H-pyrano[3,4-c]pyran-8-one

2D Structure

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2D Structure of 4'-O-beta-D-Glucopyranosylgentiopicroside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5678 56.78%
Caco-2 - 0.9002 90.02%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.8571 85.71%
Subcellular localzation Mitochondria 0.6837 68.37%
OATP2B1 inhibitior - 0.8539 85.39%
OATP1B1 inhibitior + 0.8617 86.17%
OATP1B3 inhibitior + 0.9443 94.43%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.9750 97.50%
BSEP inhibitior - 0.6672 66.72%
P-glycoprotein inhibitior - 0.7169 71.69%
P-glycoprotein substrate - 0.8764 87.64%
CYP3A4 substrate + 0.5896 58.96%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8676 86.76%
CYP3A4 inhibition - 0.9097 90.97%
CYP2C9 inhibition - 0.8997 89.97%
CYP2C19 inhibition - 0.8303 83.03%
CYP2D6 inhibition - 0.8926 89.26%
CYP1A2 inhibition - 0.8880 88.80%
CYP2C8 inhibition - 0.7410 74.10%
CYP inhibitory promiscuity - 0.8274 82.74%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7111 71.11%
Eye corrosion - 0.9842 98.42%
Eye irritation - 0.9279 92.79%
Skin irritation - 0.7881 78.81%
Skin corrosion - 0.9493 94.93%
Ames mutagenesis - 0.6300 63.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6516 65.16%
Micronuclear - 0.7041 70.41%
Hepatotoxicity - 0.7642 76.42%
skin sensitisation - 0.8417 84.17%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.7111 71.11%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.7024 70.24%
Acute Oral Toxicity (c) III 0.3768 37.68%
Estrogen receptor binding + 0.6859 68.59%
Androgen receptor binding + 0.6559 65.59%
Thyroid receptor binding - 0.4909 49.09%
Glucocorticoid receptor binding - 0.6064 60.64%
Aromatase binding + 0.6234 62.34%
PPAR gamma + 0.6899 68.99%
Honey bee toxicity - 0.6304 63.04%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.6300 63.00%
Fish aquatic toxicity + 0.7075 70.75%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.34% 91.11%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 96.64% 83.57%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.66% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.39% 89.00%
CHEMBL3401 O75469 Pregnane X receptor 86.85% 94.73%
CHEMBL2581 P07339 Cathepsin D 86.42% 98.95%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.02% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.31% 97.09%
CHEMBL1951 P21397 Monoamine oxidase A 85.15% 91.49%
CHEMBL253 P34972 Cannabinoid CB2 receptor 84.47% 97.25%
CHEMBL4208 P20618 Proteasome component C5 82.89% 90.00%
CHEMBL4530 P00488 Coagulation factor XIII 81.87% 96.00%
CHEMBL218 P21554 Cannabinoid CB1 receptor 81.48% 96.61%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.09% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gentiana scabra

Cross-Links

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PubChem 10896590
NPASS NPC231073
LOTUS LTS0258058
wikiData Q105162158