methyl (1R,9R,10S,11R,12R,19R)-11-acetyloxy-12-ethyl-4-[(13S,16S,17R)-17-ethyl-17-hydroxy-13-methoxycarbonyl-1,11-diazapentacyclo[13.3.1.04,12.04,16.05,10]nonadeca-5,7,9,11-tetraen-13-yl]-10-hydroxy-5-methoxy-8-methyl-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraene-10-carboxylate

Details

Top
Internal ID 177152ca-f12f-4bcf-aeaa-171468b20643
Taxonomy Alkaloids and derivatives > Vinca alkaloids
IUPAC Name methyl (1R,9R,10S,11R,12R,19R)-11-acetyloxy-12-ethyl-4-[(13S,16S,17R)-17-ethyl-17-hydroxy-13-methoxycarbonyl-1,11-diazapentacyclo[13.3.1.04,12.04,16.05,10]nonadeca-5,7,9,11-tetraen-13-yl]-10-hydroxy-5-methoxy-8-methyl-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraene-10-carboxylate
SMILES (Canonical) CCC1(CN2CCC34C1C(C2)CC(C3=NC5=CC=CC=C45)(C6=C(C=C7C(=C6)C89CCN1C8C(C=CC1)(C(C(C9N7C)(C(=O)OC)O)OC(=O)C)CC)OC)C(=O)OC)O
SMILES (Isomeric) CC[C@@]1(CN2CCC34[C@@H]1C(C2)C[C@@](C3=NC5=CC=CC=C45)(C6=C(C=C7C(=C6)[C@]89CCN1[C@H]8[C@@](C=CC1)([C@H]([C@@]([C@@H]9N7C)(C(=O)OC)O)OC(=O)C)CC)OC)C(=O)OC)O
InChI InChI=1S/C46H56N4O9/c1-8-41-15-12-18-50-20-17-44(36(41)50)29-21-30(33(56-5)22-32(29)48(4)37(44)46(55,40(53)58-7)38(41)59-26(3)51)45(39(52)57-6)23-27-24-49-19-16-43(34(27)42(54,9-2)25-49)28-13-10-11-14-31(28)47-35(43)45/h10-15,21-22,27,34,36-38,54-55H,8-9,16-20,23-25H2,1-7H3/t27?,34-,36+,37-,38-,41-,42+,43?,44-,45+,46+/m1/s1
InChI Key AYFGUFZGUHLVPW-VAWQDHDZSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C46H56N4O9
Molecular Weight 809.00 g/mol
Exact Mass 808.40472938 g/mol
Topological Polar Surface Area (TPSA) 151.00 Ų
XlogP 2.80
Atomic LogP (AlogP) 3.57
H-Bond Acceptor 13
H-Bond Donor 2
Rotatable Bonds 7

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of methyl (1R,9R,10S,11R,12R,19R)-11-acetyloxy-12-ethyl-4-[(13S,16S,17R)-17-ethyl-17-hydroxy-13-methoxycarbonyl-1,11-diazapentacyclo[13.3.1.04,12.04,16.05,10]nonadeca-5,7,9,11-tetraen-13-yl]-10-hydroxy-5-methoxy-8-methyl-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraene-10-carboxylate

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7980 79.80%
Caco-2 - 0.7363 73.63%
Blood Brain Barrier + 0.5750 57.50%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.6668 66.68%
OATP2B1 inhibitior - 0.8006 80.06%
OATP1B1 inhibitior + 0.8509 85.09%
OATP1B3 inhibitior + 0.9183 91.83%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.7500 75.00%
BSEP inhibitior + 0.9963 99.63%
P-glycoprotein inhibitior + 0.8111 81.11%
P-glycoprotein substrate + 0.9090 90.90%
CYP3A4 substrate + 0.7657 76.57%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.7716 77.16%
CYP3A4 inhibition - 0.5933 59.33%
CYP2C9 inhibition - 0.8902 89.02%
CYP2C19 inhibition - 0.8514 85.14%
CYP2D6 inhibition - 0.8199 81.99%
CYP1A2 inhibition - 0.9238 92.38%
CYP2C8 inhibition + 0.5429 54.29%
CYP inhibitory promiscuity - 0.9306 93.06%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.5649 56.49%
Eye corrosion - 0.9867 98.67%
Eye irritation - 0.9324 93.24%
Skin irritation - 0.7822 78.22%
Skin corrosion - 0.9369 93.69%
Ames mutagenesis - 0.7300 73.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6933 69.33%
Micronuclear + 0.6900 69.00%
Hepatotoxicity - 0.5551 55.51%
skin sensitisation - 0.8552 85.52%
Respiratory toxicity + 0.8556 85.56%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity - 0.5815 58.15%
Acute Oral Toxicity (c) III 0.6022 60.22%
Estrogen receptor binding + 0.8593 85.93%
Androgen receptor binding + 0.8020 80.20%
Thyroid receptor binding + 0.7972 79.72%
Glucocorticoid receptor binding + 0.8598 85.98%
Aromatase binding - 0.5524 55.24%
PPAR gamma + 0.8436 84.36%
Honey bee toxicity - 0.7036 70.36%
Biodegradation - 0.9750 97.50%
Crustacea aquatic toxicity + 0.6653 66.53%
Fish aquatic toxicity + 0.9750 97.50%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 99.85% 85.14%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.76% 96.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.95% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.73% 86.33%
CHEMBL335 P18031 Protein-tyrosine phosphatase 1B 95.40% 95.17%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 91.44% 91.11%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 90.90% 92.62%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 89.92% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 89.89% 94.00%
CHEMBL2581 P07339 Cathepsin D 88.99% 98.95%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 88.72% 93.65%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 86.00% 95.50%
CHEMBL4208 P20618 Proteasome component C5 85.21% 90.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.19% 95.89%
CHEMBL4040 P28482 MAP kinase ERK2 83.78% 83.82%
CHEMBL5028 O14672 ADAM10 83.50% 97.50%
CHEMBL2535 P11166 Glucose transporter 83.36% 98.75%
CHEMBL5747 Q92793 CREB-binding protein 82.81% 95.12%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 82.48% 82.69%
CHEMBL205 P00918 Carbonic anhydrase II 82.32% 98.44%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.08% 97.14%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.58% 95.89%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Catharanthus roseus

Cross-Links

Top
PubChem 5315219
NPASS NPC86782