3,7-Dimethyl-9-[(1S)-2,2-dimethyl-6-methylenecyclohexyl]-2,6-nonadiene-1-ol

Details

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Internal ID a4d834ba-2ade-4650-a9df-5b215df26a5b
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Retinoids
IUPAC Name (2E,6E)-9-[(1S)-2,2-dimethyl-6-methylidenecyclohexyl]-3,7-dimethylnona-2,6-dien-1-ol
SMILES (Canonical) CC(=CCCC(=CCO)C)CCC1C(=C)CCCC1(C)C
SMILES (Isomeric) C/C(=C\CC/C(=C/CO)/C)/CC[C@@H]1C(=C)CCCC1(C)C
InChI InChI=1S/C20H34O/c1-16(8-6-9-17(2)13-15-21)11-12-19-18(3)10-7-14-20(19,4)5/h8,13,19,21H,3,6-7,9-12,14-15H2,1-2,4-5H3/b16-8+,17-13+/t19-/m1/s1
InChI Key YHXQJKUUMBTWSB-SOXCBWEDSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C20H34O
Molecular Weight 290.50 g/mol
Exact Mass 290.260965704 g/mol
Topological Polar Surface Area (TPSA) 20.20 Ų
XlogP 6.20
Atomic LogP (AlogP) 5.81
H-Bond Acceptor 1
H-Bond Donor 1
Rotatable Bonds 7

Synonyms

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(2E,6E)-9-[(1S)-2,2-dimethyl-6-methylene-cyclohexyl]-3,7-dimethyl-nona-2,6-dien-1-ol
9-(2,2-Dimethyl-6-methylene-cyclohexyl)-3,7-dimethyl-nona-2,6-dien-1-ol, S-(+)-(2E,6E)-

2D Structure

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2D Structure of 3,7-Dimethyl-9-[(1S)-2,2-dimethyl-6-methylenecyclohexyl]-2,6-nonadiene-1-ol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9814 98.14%
Caco-2 + 0.7577 75.77%
Blood Brain Barrier + 0.9500 95.00%
Human oral bioavailability - 0.5429 54.29%
Subcellular localzation Lysosomes 0.7768 77.68%
OATP2B1 inhibitior - 0.8534 85.34%
OATP1B1 inhibitior + 0.8375 83.75%
OATP1B3 inhibitior - 0.2918 29.18%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.6250 62.50%
BSEP inhibitior + 0.7564 75.64%
P-glycoprotein inhibitior - 0.7874 78.74%
P-glycoprotein substrate - 0.8443 84.43%
CYP3A4 substrate + 0.5598 55.98%
CYP2C9 substrate - 0.7919 79.19%
CYP2D6 substrate - 0.7754 77.54%
CYP3A4 inhibition - 0.6817 68.17%
CYP2C9 inhibition - 0.8131 81.31%
CYP2C19 inhibition - 0.8318 83.18%
CYP2D6 inhibition - 0.9100 91.00%
CYP1A2 inhibition - 0.8672 86.72%
CYP2C8 inhibition - 0.6411 64.11%
CYP inhibitory promiscuity - 0.6664 66.64%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.7928 79.28%
Carcinogenicity (trinary) Non-required 0.6375 63.75%
Eye corrosion - 0.8864 88.64%
Eye irritation - 0.8507 85.07%
Skin irritation + 0.5590 55.90%
Skin corrosion - 0.9724 97.24%
Ames mutagenesis - 0.7900 79.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7241 72.41%
Micronuclear - 1.0000 100.00%
Hepatotoxicity - 0.6500 65.00%
skin sensitisation + 0.7625 76.25%
Respiratory toxicity - 0.6111 61.11%
Reproductive toxicity + 0.5444 54.44%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.6777 67.77%
Acute Oral Toxicity (c) III 0.8343 83.43%
Estrogen receptor binding - 0.7334 73.34%
Androgen receptor binding - 0.5901 59.01%
Thyroid receptor binding + 0.5645 56.45%
Glucocorticoid receptor binding + 0.5724 57.24%
Aromatase binding - 0.5411 54.11%
PPAR gamma + 0.7005 70.05%
Honey bee toxicity - 0.8985 89.85%
Biodegradation - 0.5000 50.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9947 99.47%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.50% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 96.42% 97.25%
CHEMBL4040 P28482 MAP kinase ERK2 94.43% 83.82%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 89.24% 96.09%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 88.55% 95.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.31% 100.00%
CHEMBL1937 Q92769 Histone deacetylase 2 86.78% 94.75%
CHEMBL233 P35372 Mu opioid receptor 86.01% 97.93%
CHEMBL1977 P11473 Vitamin D receptor 85.88% 99.43%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.76% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.46% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 80.68% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Bellardia trixago

Cross-Links

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PubChem 6476773
LOTUS LTS0049537
wikiData Q105348655