(2R,3R,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-[(2E,4S)-4-hydroxy-3,7-dimethylocta-2,6-dienoxy]oxan-2-yl]methoxy]oxane-3,4,5-triol

Details

Top
Internal ID c1f65649-3dad-4187-9a8a-df742b4f4bba
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name (2R,3R,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-[(2E,4S)-4-hydroxy-3,7-dimethylocta-2,6-dienoxy]oxan-2-yl]methoxy]oxane-3,4,5-triol
SMILES (Canonical) CC(=CCC(C(=CCOC1C(C(C(C(O1)COC2C(C(C(C(O2)CO)O)O)O)O)O)O)C)O)C
SMILES (Isomeric) CC(=CC[C@@H](/C(=C/CO[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO[C@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)O)O)O)O)/C)O)C
InChI InChI=1S/C22H38O12/c1-10(2)4-5-12(24)11(3)6-7-31-21-19(29)18(28)16(26)14(34-21)9-32-22-20(30)17(27)15(25)13(8-23)33-22/h4,6,12-30H,5,7-9H2,1-3H3/b11-6+/t12-,13+,14+,15-,16-,17-,18-,19+,20+,21+,22+/m0/s1
InChI Key UMJYSOBAPZQHQC-FWUHSMEUSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C22H38O12
Molecular Weight 494.50 g/mol
Exact Mass 494.23632664 g/mol
Topological Polar Surface Area (TPSA) 199.00 Ų
XlogP -2.00
Atomic LogP (AlogP) -2.71
H-Bond Acceptor 12
H-Bond Donor 8
Rotatable Bonds 10

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R,3R,4S,5R,6R)-2-(hydroxymethyl)-6-[[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-[(2E,4S)-4-hydroxy-3,7-dimethylocta-2,6-dienoxy]oxan-2-yl]methoxy]oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6841 68.41%
Caco-2 - 0.8866 88.66%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.7714 77.14%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8928 89.28%
OATP1B3 inhibitior + 0.9244 92.44%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.8635 86.35%
P-glycoprotein inhibitior - 0.7550 75.50%
P-glycoprotein substrate - 0.9065 90.65%
CYP3A4 substrate + 0.5519 55.19%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8353 83.53%
CYP3A4 inhibition - 0.9706 97.06%
CYP2C9 inhibition - 0.9037 90.37%
CYP2C19 inhibition - 0.8781 87.81%
CYP2D6 inhibition - 0.8873 88.73%
CYP1A2 inhibition - 0.9051 90.51%
CYP2C8 inhibition - 0.8134 81.34%
CYP inhibitory promiscuity - 0.9269 92.69%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7514 75.14%
Eye corrosion - 0.9895 98.95%
Eye irritation - 0.9547 95.47%
Skin irritation - 0.8192 81.92%
Skin corrosion - 0.9611 96.11%
Ames mutagenesis - 0.6854 68.54%
Human Ether-a-go-go-Related Gene inhibition + 0.6442 64.42%
Micronuclear - 0.8200 82.00%
Hepatotoxicity - 0.6916 69.16%
skin sensitisation - 0.8674 86.74%
Respiratory toxicity - 0.7111 71.11%
Reproductive toxicity + 0.5889 58.89%
Mitochondrial toxicity - 0.6500 65.00%
Nephrotoxicity + 0.4887 48.87%
Acute Oral Toxicity (c) III 0.6053 60.53%
Estrogen receptor binding + 0.5500 55.00%
Androgen receptor binding - 0.6716 67.16%
Thyroid receptor binding + 0.5517 55.17%
Glucocorticoid receptor binding - 0.6123 61.23%
Aromatase binding + 0.6355 63.55%
PPAR gamma + 0.6399 63.99%
Honey bee toxicity - 0.7776 77.76%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.9600 96.00%
Fish aquatic toxicity + 0.7134 71.34%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.53% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.64% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.14% 85.14%
CHEMBL3401 O75469 Pregnane X receptor 89.88% 94.73%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.71% 97.25%
CHEMBL2581 P07339 Cathepsin D 87.17% 98.95%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 86.42% 86.92%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.53% 94.45%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Rhodiola rosea

Cross-Links

Top
PubChem 163046682
LOTUS LTS0181333
wikiData Q105275592