3-[(E)-2-[(1R,2S)-1,4-dimethyl-2-(1,4,5-trihydroxy-9-oxoxanthen-3-yl)cyclohex-3-en-1-yl]ethenyl]-1,4,5-trihydroxyxanthen-9-one

Details

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Internal ID 6b335262-c306-4fd0-b2ea-95bcaf00007b
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 3-[(E)-2-[(1R,2S)-1,4-dimethyl-2-(1,4,5-trihydroxy-9-oxoxanthen-3-yl)cyclohex-3-en-1-yl]ethenyl]-1,4,5-trihydroxyxanthen-9-one
SMILES (Canonical) CC1=CC(C(CC1)(C)C=CC2=CC(=C3C(=C2O)OC4=C(C3=O)C=CC=C4O)O)C5=CC(=C6C(=C5O)OC7=C(C6=O)C=CC=C7O)O
SMILES (Isomeric) CC1=C[C@@H]([C@@](CC1)(C)/C=C/C2=CC(=C3C(=C2O)OC4=C(C3=O)C=CC=C4O)O)C5=CC(=C6C(=C5O)OC7=C(C6=O)C=CC=C7O)O
InChI InChI=1S/C36H28O10/c1-16-9-11-36(2,12-10-17-14-24(39)26-29(42)18-5-3-7-22(37)32(18)45-34(26)28(17)41)21(13-16)20-15-25(40)27-30(43)19-6-4-8-23(38)33(19)46-35(27)31(20)44/h3-8,10,12-15,21,37-41,44H,9,11H2,1-2H3/b12-10+/t21-,36-/m1/s1
InChI Key XYRCPMXSIHHGSO-SZGHPNGOSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C36H28O10
Molecular Weight 620.60 g/mol
Exact Mass 620.16824709 g/mol
Topological Polar Surface Area (TPSA) 174.00 Ų
XlogP 7.30
Atomic LogP (AlogP) 6.98
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 3-[(E)-2-[(1R,2S)-1,4-dimethyl-2-(1,4,5-trihydroxy-9-oxoxanthen-3-yl)cyclohex-3-en-1-yl]ethenyl]-1,4,5-trihydroxyxanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9825 98.25%
Caco-2 - 0.8612 86.12%
Blood Brain Barrier - 0.7500 75.00%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.7841 78.41%
OATP2B1 inhibitior + 0.8572 85.72%
OATP1B1 inhibitior + 0.8778 87.78%
OATP1B3 inhibitior + 0.9640 96.40%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8319 83.19%
BSEP inhibitior + 0.9659 96.59%
P-glycoprotein inhibitior + 0.7567 75.67%
P-glycoprotein substrate + 0.5000 50.00%
CYP3A4 substrate + 0.7106 71.06%
CYP2C9 substrate + 0.6145 61.45%
CYP2D6 substrate - 0.8366 83.66%
CYP3A4 inhibition - 0.6474 64.74%
CYP2C9 inhibition + 0.6898 68.98%
CYP2C19 inhibition - 0.5755 57.55%
CYP2D6 inhibition - 0.8281 82.81%
CYP1A2 inhibition - 0.5000 50.00%
CYP2C8 inhibition + 0.7053 70.53%
CYP inhibitory promiscuity + 0.5168 51.68%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5832 58.32%
Eye corrosion - 0.9914 99.14%
Eye irritation - 0.8721 87.21%
Skin irritation - 0.6679 66.79%
Skin corrosion - 0.9030 90.30%
Ames mutagenesis + 0.6746 67.46%
Human Ether-a-go-go-Related Gene inhibition + 0.7043 70.43%
Micronuclear - 0.5700 57.00%
Hepatotoxicity + 0.5305 53.05%
skin sensitisation - 0.7811 78.11%
Respiratory toxicity + 0.6667 66.67%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.6375 63.75%
Nephrotoxicity - 0.9068 90.68%
Acute Oral Toxicity (c) III 0.5329 53.29%
Estrogen receptor binding + 0.8126 81.26%
Androgen receptor binding + 0.7527 75.27%
Thyroid receptor binding + 0.6304 63.04%
Glucocorticoid receptor binding + 0.7615 76.15%
Aromatase binding + 0.5838 58.38%
PPAR gamma + 0.7786 77.86%
Honey bee toxicity - 0.7503 75.03%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9925 99.25%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.69% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 98.51% 95.56%
CHEMBL1937 Q92769 Histone deacetylase 2 97.71% 94.75%
CHEMBL3192 Q9BY41 Histone deacetylase 8 97.11% 93.99%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.46% 94.45%
CHEMBL1951 P21397 Monoamine oxidase A 95.68% 91.49%
CHEMBL1806 P11388 DNA topoisomerase II alpha 95.24% 89.00%
CHEMBL2581 P07339 Cathepsin D 92.91% 98.95%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 92.27% 85.30%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 91.34% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.99% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.51% 95.89%
CHEMBL1994 P08235 Mineralocorticoid receptor 86.52% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 84.95% 94.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 83.71% 99.15%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.82% 92.62%
CHEMBL5678 P34947 G protein-coupled receptor kinase 5 81.79% 88.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia livingstonei

Cross-Links

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PubChem 163195032
LOTUS LTS0046167
wikiData Q105344631