methyl (2S,3R,4S)-4-[[(2R,4aR,6S,7R,8R,8aS)-6-[[(3S,4R,4aS)-4-ethenyl-8-oxo-4,4a,5,6-tetrahydro-3H-pyrano[3,4-c]pyran-3-yl]oxy]-7,8-dihydroxy-4,4a,6,7,8,8a-hexahydropyrano[3,2-d][1,3]dioxin-2-yl]methyl]-3-ethenyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-5-carboxylate

Details

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Internal ID 31875ea3-e98c-4b53-8b82-a5962d276768
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name methyl (2S,3R,4S)-4-[[(2R,4aR,6S,7R,8R,8aS)-6-[[(3S,4R,4aS)-4-ethenyl-8-oxo-4,4a,5,6-tetrahydro-3H-pyrano[3,4-c]pyran-3-yl]oxy]-7,8-dihydroxy-4,4a,6,7,8,8a-hexahydropyrano[3,2-d][1,3]dioxin-2-yl]methyl]-3-ethenyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-5-carboxylate
SMILES (Canonical) COC(=O)C1=COC(C(C1CC2OCC3C(O2)C(C(C(O3)OC4C(C5CCOC(=O)C5=CO4)C=C)O)O)C=C)OC6C(C(C(C(O6)CO)O)O)O
SMILES (Isomeric) COC(=O)C1=CO[C@H]([C@@H]([C@@H]1C[C@@H]2OC[C@@H]3[C@@H](O2)[C@@H]([C@H]([C@@H](O3)O[C@H]4[C@@H]([C@@H]5CCOC(=O)C5=CO4)C=C)O)O)C=C)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O
InChI InChI=1S/C33H44O18/c1-4-13-15-6-7-43-29(41)17(15)10-45-30(13)50-33-26(39)24(37)27-20(48-33)12-44-21(49-27)8-16-14(5-2)31(46-11-18(16)28(40)42-3)51-32-25(38)23(36)22(35)19(9-34)47-32/h4-5,10-11,13-16,19-27,30-39H,1-2,6-9,12H2,3H3/t13-,14-,15+,16+,19-,20-,21-,22-,23+,24-,25-,26-,27-,30+,31+,32+,33+/m1/s1
InChI Key HADYJKOVEHJYKM-VLTHOYLRSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C33H44O18
Molecular Weight 728.70 g/mol
Exact Mass 728.25276455 g/mol
Topological Polar Surface Area (TPSA) 248.00 Ų
XlogP -1.40
Atomic LogP (AlogP) -2.17
H-Bond Acceptor 18
H-Bond Donor 6
Rotatable Bonds 10

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (2S,3R,4S)-4-[[(2R,4aR,6S,7R,8R,8aS)-6-[[(3S,4R,4aS)-4-ethenyl-8-oxo-4,4a,5,6-tetrahydro-3H-pyrano[3,4-c]pyran-3-yl]oxy]-7,8-dihydroxy-4,4a,6,7,8,8a-hexahydropyrano[3,2-d][1,3]dioxin-2-yl]methyl]-3-ethenyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydro-2H-pyran-5-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6263 62.63%
Caco-2 - 0.8743 87.43%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.8064 80.64%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.7853 78.53%
OATP1B3 inhibitior + 0.9463 94.63%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.6123 61.23%
P-glycoprotein inhibitior + 0.6784 67.84%
P-glycoprotein substrate + 0.5933 59.33%
CYP3A4 substrate + 0.7112 71.12%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8638 86.38%
CYP3A4 inhibition - 0.9280 92.80%
CYP2C9 inhibition - 0.8876 88.76%
CYP2C19 inhibition - 0.8361 83.61%
CYP2D6 inhibition - 0.9061 90.61%
CYP1A2 inhibition - 0.8440 84.40%
CYP2C8 inhibition + 0.6993 69.93%
CYP inhibitory promiscuity - 0.9121 91.21%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6098 60.98%
Eye corrosion - 0.9802 98.02%
Eye irritation - 0.9090 90.90%
Skin irritation - 0.7618 76.18%
Skin corrosion - 0.9398 93.98%
Ames mutagenesis - 0.5070 50.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7145 71.45%
Micronuclear - 0.7641 76.41%
Hepatotoxicity - 0.6466 64.66%
skin sensitisation - 0.8618 86.18%
Respiratory toxicity + 0.6889 68.89%
Reproductive toxicity + 0.7889 78.89%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity + 0.5723 57.23%
Acute Oral Toxicity (c) III 0.5555 55.55%
Estrogen receptor binding + 0.8006 80.06%
Androgen receptor binding + 0.6791 67.91%
Thyroid receptor binding - 0.5429 54.29%
Glucocorticoid receptor binding + 0.6338 63.38%
Aromatase binding + 0.5836 58.36%
PPAR gamma + 0.6899 68.99%
Honey bee toxicity - 0.7015 70.15%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.6900 69.00%
Fish aquatic toxicity + 0.7360 73.60%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL220 P22303 Acetylcholinesterase 97.15% 94.45%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.11% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 93.73% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.88% 97.09%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 91.01% 91.24%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.22% 95.56%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 89.22% 86.92%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 88.15% 96.00%
CHEMBL2581 P07339 Cathepsin D 88.09% 98.95%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.03% 95.89%
CHEMBL3401 O75469 Pregnane X receptor 84.99% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 84.80% 86.33%
CHEMBL1806 P11388 DNA topoisomerase II alpha 83.07% 89.00%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.70% 95.83%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.33% 99.17%
CHEMBL5028 O14672 ADAM10 82.14% 97.50%
CHEMBL5255 O00206 Toll-like receptor 4 81.78% 92.50%
CHEMBL1994 P08235 Mineralocorticoid receptor 81.13% 100.00%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 80.11% 85.14%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Lonicera caerulea

Cross-Links

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PubChem 101922273
LOTUS LTS0099889
wikiData Q105024815