3-O-alpha-L-Rhamnopyranosylcannogenol

Details

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Internal ID 0ad2da04-e232-4855-a436-bd2e9e9ca5f2
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones > Cardenolides and derivatives > Cardenolide glycosides and derivatives
IUPAC Name 3-[(3S,5R,8R,9S,10R,13R,14S,17R)-14-hydroxy-10-(hydroxymethyl)-13-methyl-3-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-1,2,3,4,5,6,7,8,9,11,12,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-2H-furan-5-one
SMILES (Canonical) CC1C(C(C(C(O1)OC2CCC3(C(C2)CCC4C3CCC5(C4(CCC5C6=CC(=O)OC6)O)C)CO)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@H]2CC[C@]3([C@@H](C2)CC[C@@H]4[C@@H]3CC[C@]5([C@@]4(CC[C@@H]5C6=CC(=O)OC6)O)C)CO)O)O)O
InChI InChI=1S/C29H44O9/c1-15-23(32)24(33)25(34)26(37-15)38-18-5-9-28(14-30)17(12-18)3-4-21-20(28)6-8-27(2)19(7-10-29(21,27)35)16-11-22(31)36-13-16/h11,15,17-21,23-26,30,32-35H,3-10,12-14H2,1-2H3/t15-,17+,18-,19+,20-,21+,23-,24+,25+,26-,27+,28+,29-/m0/s1
InChI Key WPVGSIBYLZQSIK-XUAZSLIYSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C29H44O9
Molecular Weight 536.70 g/mol
Exact Mass 536.29853298 g/mol
Topological Polar Surface Area (TPSA) 146.00 Ų
XlogP 0.90
Atomic LogP (AlogP) 1.43
H-Bond Acceptor 9
H-Bond Donor 5
Rotatable Bonds 4

Synonyms

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3-O-alpha-L-Rhamnopyranosylcannogenol

2D Structure

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2D Structure of 3-O-alpha-L-Rhamnopyranosylcannogenol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8248 82.48%
Caco-2 - 0.8435 84.35%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.8382 83.82%
OATP2B1 inhibitior - 0.6277 62.77%
OATP1B1 inhibitior + 0.9316 93.16%
OATP1B3 inhibitior + 0.9481 94.81%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.6593 65.93%
P-glycoprotein inhibitior - 0.5340 53.40%
P-glycoprotein substrate + 0.6259 62.59%
CYP3A4 substrate + 0.6998 69.98%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9010 90.10%
CYP3A4 inhibition - 0.9241 92.41%
CYP2C9 inhibition - 0.9242 92.42%
CYP2C19 inhibition - 0.9271 92.71%
CYP2D6 inhibition - 0.9231 92.31%
CYP1A2 inhibition - 0.9045 90.45%
CYP2C8 inhibition - 0.6458 64.58%
CYP inhibitory promiscuity - 0.9179 91.79%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6086 60.86%
Eye corrosion - 0.9907 99.07%
Eye irritation - 0.9474 94.74%
Skin irritation - 0.5648 56.48%
Skin corrosion - 0.9423 94.23%
Ames mutagenesis - 0.6424 64.24%
Human Ether-a-go-go-Related Gene inhibition + 0.8636 86.36%
Micronuclear - 0.8600 86.00%
Hepatotoxicity - 0.7000 70.00%
skin sensitisation - 0.9189 91.89%
Respiratory toxicity + 0.8778 87.78%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.7728 77.28%
Acute Oral Toxicity (c) I 0.8357 83.57%
Estrogen receptor binding + 0.8148 81.48%
Androgen receptor binding + 0.8053 80.53%
Thyroid receptor binding - 0.6015 60.15%
Glucocorticoid receptor binding + 0.6047 60.47%
Aromatase binding + 0.7094 70.94%
PPAR gamma - 0.5094 50.94%
Honey bee toxicity - 0.7092 70.92%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9498 94.98%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.64% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.17% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 95.61% 100.00%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 94.64% 96.77%
CHEMBL3137262 O60341 LSD1/CoREST complex 94.17% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.69% 86.33%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 92.41% 94.45%
CHEMBL253 P34972 Cannabinoid CB2 receptor 91.30% 97.25%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 89.61% 82.69%
CHEMBL2581 P07339 Cathepsin D 87.90% 98.95%
CHEMBL1293277 O15118 Niemann-Pick C1 protein 87.87% 81.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.65% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.60% 94.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.04% 95.89%
CHEMBL3714130 P46095 G-protein coupled receptor 6 85.99% 97.36%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.24% 89.00%
CHEMBL3492 P49721 Proteasome Macropain subunit 84.16% 90.24%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.32% 92.94%
CHEMBL4208 P20618 Proteasome component C5 82.50% 90.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.96% 95.89%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 80.34% 98.46%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Antiaris toxicaria
Saussurea stella

Cross-Links

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PubChem 21123891
NPASS NPC193382
ChEMBL CHEMBL400877
LOTUS LTS0062420
wikiData Q105310214