(2R,3R,4R,5R)-2-[(9R)-9,13-dihydroxytridecyl]-5-(hydroxymethyl)pyrrolidine-3,4-diol

Details

Top
Internal ID 2e68cf4a-8617-45ad-95f3-068c2990a042
Taxonomy Organoheterocyclic compounds > Pyrrolidines
IUPAC Name (2R,3R,4R,5R)-2-[(9R)-9,13-dihydroxytridecyl]-5-(hydroxymethyl)pyrrolidine-3,4-diol
SMILES (Canonical) C(CCCCC(CCCCO)O)CCCC1C(C(C(N1)CO)O)O
SMILES (Isomeric) C(CCCC[C@H](CCCCO)O)CCC[C@@H]1[C@H]([C@@H]([C@H](N1)CO)O)O
InChI InChI=1S/C18H37NO5/c20-12-8-7-10-14(22)9-5-3-1-2-4-6-11-15-17(23)18(24)16(13-21)19-15/h14-24H,1-13H2/t14-,15-,16-,17-,18-/m1/s1
InChI Key RESBTRYGXXYJTJ-DUQPFJRNSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C18H37NO5
Molecular Weight 347.50 g/mol
Exact Mass 347.26717328 g/mol
Topological Polar Surface Area (TPSA) 113.00 Ų
XlogP 1.70
Atomic LogP (AlogP) 0.69
H-Bond Acceptor 6
H-Bond Donor 6
Rotatable Bonds 14

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R,3R,4R,5R)-2-[(9R)-9,13-dihydroxytridecyl]-5-(hydroxymethyl)pyrrolidine-3,4-diol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7384 73.84%
Caco-2 - 0.8773 87.73%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7143 71.43%
Subcellular localzation Mitochondria 0.5824 58.24%
OATP2B1 inhibitior - 0.8534 85.34%
OATP1B1 inhibitior + 0.9534 95.34%
OATP1B3 inhibitior + 0.9411 94.11%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.8304 83.04%
P-glycoprotein inhibitior - 0.8853 88.53%
P-glycoprotein substrate - 0.7052 70.52%
CYP3A4 substrate - 0.5424 54.24%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.4714 47.14%
CYP3A4 inhibition - 0.9900 99.00%
CYP2C9 inhibition - 0.9444 94.44%
CYP2C19 inhibition - 0.9529 95.29%
CYP2D6 inhibition - 0.9216 92.16%
CYP1A2 inhibition - 0.8554 85.54%
CYP2C8 inhibition - 0.9010 90.10%
CYP inhibitory promiscuity - 0.9814 98.14%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9500 95.00%
Carcinogenicity (trinary) Non-required 0.7034 70.34%
Eye corrosion - 0.9584 95.84%
Eye irritation - 0.7995 79.95%
Skin irritation - 0.7382 73.82%
Skin corrosion - 0.8442 84.42%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6701 67.01%
Micronuclear - 0.5100 51.00%
Hepatotoxicity - 0.5759 57.59%
skin sensitisation - 0.8931 89.31%
Respiratory toxicity - 0.7000 70.00%
Reproductive toxicity + 0.5667 56.67%
Mitochondrial toxicity + 0.7125 71.25%
Nephrotoxicity + 0.5388 53.88%
Acute Oral Toxicity (c) III 0.5734 57.34%
Estrogen receptor binding - 0.5911 59.11%
Androgen receptor binding - 0.5866 58.66%
Thyroid receptor binding + 0.5224 52.24%
Glucocorticoid receptor binding + 0.5690 56.90%
Aromatase binding - 0.6098 60.98%
PPAR gamma - 0.6582 65.82%
Honey bee toxicity - 0.8703 87.03%
Biodegradation + 0.5250 52.50%
Crustacea aquatic toxicity - 0.8456 84.56%
Fish aquatic toxicity - 0.9810 98.10%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.57% 96.09%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 92.93% 97.29%
CHEMBL3137262 O60341 LSD1/CoREST complex 90.17% 97.09%
CHEMBL1907589 P17787 Neuronal acetylcholine receptor; alpha4/beta2 90.16% 94.55%
CHEMBL2996 Q05655 Protein kinase C delta 89.35% 97.79%
CHEMBL2581 P07339 Cathepsin D 88.07% 98.95%
CHEMBL2885 P07451 Carbonic anhydrase III 87.22% 87.45%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 86.39% 97.23%
CHEMBL5103 Q969S8 Histone deacetylase 10 85.52% 90.08%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 84.62% 92.88%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.54% 94.45%
CHEMBL237 P41145 Kappa opioid receptor 82.99% 98.10%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 82.80% 86.92%
CHEMBL1865 Q9UBN7 Histone deacetylase 6 82.09% 97.03%
CHEMBL3060 Q9Y345 Glycine transporter 2 81.41% 99.17%
CHEMBL213 P08588 Beta-1 adrenergic receptor 80.75% 95.56%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 80.57% 91.11%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Broussonetia papyrifera

Cross-Links

Top
PubChem 10860963
LOTUS LTS0258103
wikiData Q105235053