(2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[[(12S)-12-hydroxy-2-oxatricyclo[13.2.2.13,7]icosa-1(17),3,5,7(20),15,18-hexaen-5-yl]oxy]oxane-3,4,5-triol

Details

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Internal ID 8720ef6b-0c57-46e3-8355-8dcc1690e038
Taxonomy Lignans, neolignans and related compounds > Lignan glycosides
IUPAC Name (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[[(12S)-12-hydroxy-2-oxatricyclo[13.2.2.13,7]icosa-1(17),3,5,7(20),15,18-hexaen-5-yl]oxy]oxane-3,4,5-triol
SMILES (Canonical) C1CCC2=CC(=CC(=C2)OC3C(C(C(C(O3)CO)O)O)O)OC4=CC=C(CCC(C1)O)C=C4
SMILES (Isomeric) C1CCC2=CC(=CC(=C2)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)OC4=CC=C(CC[C@H](C1)O)C=C4
InChI InChI=1S/C25H32O8/c26-14-21-22(28)23(29)24(30)25(33-21)32-20-12-16-3-1-2-4-17(27)8-5-15-6-9-18(10-7-15)31-19(11-16)13-20/h6-7,9-13,17,21-30H,1-5,8,14H2/t17-,21+,22+,23-,24+,25+/m0/s1
InChI Key QDFFZLGRZWFWKQ-BVLUCXKNSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C25H32O8
Molecular Weight 460.50 g/mol
Exact Mass 460.20971797 g/mol
Topological Polar Surface Area (TPSA) 129.00 Ų
XlogP 2.60
Atomic LogP (AlogP) 1.68
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3S,4S,5R,6S)-2-(hydroxymethyl)-6-[[(12S)-12-hydroxy-2-oxatricyclo[13.2.2.13,7]icosa-1(17),3,5,7(20),15,18-hexaen-5-yl]oxy]oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7923 79.23%
Caco-2 - 0.8424 84.24%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.6571 65.71%
Subcellular localzation Mitochondria 0.7237 72.37%
OATP2B1 inhibitior - 0.8592 85.92%
OATP1B1 inhibitior + 0.9242 92.42%
OATP1B3 inhibitior + 0.9247 92.47%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior + 0.6698 66.98%
P-glycoprotein inhibitior - 0.4718 47.18%
P-glycoprotein substrate - 0.8517 85.17%
CYP3A4 substrate + 0.5771 57.71%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8028 80.28%
CYP3A4 inhibition - 0.9208 92.08%
CYP2C9 inhibition - 0.9160 91.60%
CYP2C19 inhibition - 0.8370 83.70%
CYP2D6 inhibition - 0.8664 86.64%
CYP1A2 inhibition - 0.8821 88.21%
CYP2C8 inhibition + 0.4922 49.22%
CYP inhibitory promiscuity - 0.9537 95.37%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.6730 67.30%
Eye corrosion - 0.9926 99.26%
Eye irritation - 0.9336 93.36%
Skin irritation - 0.8149 81.49%
Skin corrosion - 0.9676 96.76%
Ames mutagenesis - 0.6040 60.40%
Human Ether-a-go-go-Related Gene inhibition + 0.8985 89.85%
Micronuclear - 0.7400 74.00%
Hepatotoxicity - 0.8375 83.75%
skin sensitisation - 0.8891 88.91%
Respiratory toxicity + 0.5667 56.67%
Reproductive toxicity + 0.5889 58.89%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.8616 86.16%
Acute Oral Toxicity (c) III 0.6253 62.53%
Estrogen receptor binding + 0.6186 61.86%
Androgen receptor binding + 0.6375 63.75%
Thyroid receptor binding - 0.5641 56.41%
Glucocorticoid receptor binding - 0.6142 61.42%
Aromatase binding + 0.5588 55.88%
PPAR gamma + 0.6295 62.95%
Honey bee toxicity - 0.8150 81.50%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.5700 57.00%
Fish aquatic toxicity + 0.7411 74.11%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.58% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.14% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.70% 97.09%
CHEMBL5608 Q16288 NT-3 growth factor receptor 93.58% 95.89%
CHEMBL1951 P21397 Monoamine oxidase A 90.16% 91.49%
CHEMBL2581 P07339 Cathepsin D 89.46% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.88% 94.45%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 85.26% 92.62%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.13% 94.00%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 84.51% 89.67%
CHEMBL241 Q14432 Phosphodiesterase 3A 83.25% 92.94%
CHEMBL226 P30542 Adenosine A1 receptor 82.96% 95.93%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.09% 95.83%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.98% 95.56%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Acer mandshuricum

Cross-Links

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PubChem 162971197
LOTUS LTS0048209
wikiData Q105218801