(2S,3R,4R,5R,6S)-2-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-2-[(1R,2S,4S,5'R,6S,6'R,7S,8S,9S,12S,13R,16S)-8-hydroxy-6'-methoxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

Top
Internal ID 62c7917b-e530-445a-9905-8df879479ce4
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-2-[(1R,2S,4S,5'R,6S,6'R,7S,8S,9S,12S,13R,16S)-8-hydroxy-6'-methoxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1CCC2(C(C3(C(O2)CC4C3(CCC5C4CC=C6C5(CCC(C6)OC7C(C(C(C(O7)CO)O)O)OC8C(C(C(C(O8)C)O)O)O)C)C)O)C)OC1OC
SMILES (Isomeric) C[C@@H]1CC[C@@]2([C@H]([C@]3([C@@H](O2)C[C@@H]4[C@@]3(CC[C@H]5[C@H]4CC=C6[C@@]5(CC[C@@H](C6)O[C@H]7[C@@H]([C@H]([C@@H]([C@H](O7)CO)O)O)O[C@H]8[C@@H]([C@@H]([C@H]([C@@H](O8)C)O)O)O)C)C)O)C)O[C@H]1OC
InChI InChI=1S/C40H64O14/c1-18-9-14-39(54-34(18)48-6)20(3)40(47)27(53-39)16-25-23-8-7-21-15-22(10-12-37(21,4)24(23)11-13-38(25,40)5)50-36-33(31(45)29(43)26(17-41)51-36)52-35-32(46)30(44)28(42)19(2)49-35/h7,18-20,22-36,41-47H,8-17H2,1-6H3/t18-,19+,20-,22+,23-,24+,25+,26-,27+,28+,29-,30-,31+,32-,33-,34-,35+,36-,37+,38+,39+,40-/m1/s1
InChI Key ODAJTNRHKCVAHU-BRLNXGDHSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

Top
Molecular Formula C40H64O14
Molecular Weight 768.90 g/mol
Exact Mass 768.42960671 g/mol
Topological Polar Surface Area (TPSA) 206.00 Ų
XlogP 1.80
Atomic LogP (AlogP) 1.48
H-Bond Acceptor 14
H-Bond Donor 7
Rotatable Bonds 6

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3R,4R,5R,6S)-2-[(2R,3R,4S,5S,6R)-4,5-dihydroxy-2-[(1R,2S,4S,5'R,6S,6'R,7S,8S,9S,12S,13R,16S)-8-hydroxy-6'-methoxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icos-18-ene-6,2'-oxane]-16-yl]oxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.7910 79.10%
Caco-2 - 0.8845 88.45%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.8429 84.29%
Subcellular localzation Mitochondria 0.7617 76.17%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8607 86.07%
OATP1B3 inhibitior + 0.9054 90.54%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior + 0.7439 74.39%
P-glycoprotein inhibitior + 0.7200 72.00%
P-glycoprotein substrate + 0.6386 63.86%
CYP3A4 substrate + 0.7412 74.12%
CYP2C9 substrate - 0.7915 79.15%
CYP2D6 substrate - 0.8348 83.48%
CYP3A4 inhibition - 0.9287 92.87%
CYP2C9 inhibition - 0.9010 90.10%
CYP2C19 inhibition - 0.9070 90.70%
CYP2D6 inhibition - 0.9347 93.47%
CYP1A2 inhibition - 0.8746 87.46%
CYP2C8 inhibition + 0.7812 78.12%
CYP inhibitory promiscuity - 0.8553 85.53%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5368 53.68%
Eye corrosion - 0.9889 98.89%
Eye irritation - 0.9195 91.95%
Skin irritation - 0.5601 56.01%
Skin corrosion - 0.9424 94.24%
Ames mutagenesis - 0.8970 89.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7338 73.38%
Micronuclear - 0.8400 84.00%
Hepatotoxicity - 0.8875 88.75%
skin sensitisation - 0.9171 91.71%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.8889 88.89%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.9031 90.31%
Acute Oral Toxicity (c) I 0.4340 43.40%
Estrogen receptor binding + 0.8034 80.34%
Androgen receptor binding + 0.7620 76.20%
Thyroid receptor binding - 0.5743 57.43%
Glucocorticoid receptor binding - 0.4635 46.35%
Aromatase binding + 0.6848 68.48%
PPAR gamma + 0.7194 71.94%
Honey bee toxicity - 0.6142 61.42%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9164 91.64%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.81% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 96.64% 95.93%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.40% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.24% 97.25%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.37% 97.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 93.24% 100.00%
CHEMBL1937 Q92769 Histone deacetylase 2 92.44% 94.75%
CHEMBL2243 O00519 Anandamide amidohydrolase 91.51% 97.53%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.53% 86.33%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 87.77% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 85.91% 94.00%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 85.41% 89.05%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.84% 92.94%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.71% 95.89%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 84.33% 86.92%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 84.13% 95.50%
CHEMBL218 P21554 Cannabinoid CB1 receptor 84.06% 96.61%
CHEMBL216 P11229 Muscarinic acetylcholine receptor M1 83.70% 94.23%
CHEMBL5255 O00206 Toll-like receptor 4 83.18% 92.50%
CHEMBL2581 P07339 Cathepsin D 82.94% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.56% 89.00%
CHEMBL1951 P21397 Monoamine oxidase A 82.49% 91.49%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 82.48% 94.08%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 82.39% 91.07%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 82.10% 97.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 81.89% 95.56%
CHEMBL3359 P21462 Formyl peptide receptor 1 80.10% 93.56%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Lilium candidum

Cross-Links

Top
PubChem 10557116
LOTUS LTS0272006
wikiData Q105189695