(1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,15R,16R,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-15-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one

Details

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Internal ID 4104c164-12d8-4e43-9e33-033ca0655c5f
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name (1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,15R,16R,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-15-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C44H70O19/c1-17-7-8-44(57-15-17)18(2)30-26(63-44)10-22-20-6-5-19-9-25(23(47)12-42(19,3)21(20)11-29(49)43(22,30)4)58-40-36(55)34(53)37(28(14-46)60-40)61-41-38(33(52)32(51)27(13-45)59-41)62-39-35(54)31(50)24(48)16-56-39/h17-28,30-41,45-48,50-55H,5-16H2,1-4H3/t17-,18+,19+,20-,21+,22+,23-,24-,25-,26+,27-,28-,30+,31+,32-,33+,34-,35-,36-,37+,38-,39+,40-,41+,42+,43-,44-/m1/s1
InChI Key PLVBBFMJIOMIRX-DDDHDNKSSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C44H70O19
Molecular Weight 903.00 g/mol
Exact Mass 902.45113000 g/mol
Topological Polar Surface Area (TPSA) 293.00 Ų
XlogP -1.40
Atomic LogP (AlogP) -1.94
H-Bond Acceptor 19
H-Bond Donor 10
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (1R,2S,4S,5'R,6R,7S,8R,9S,12S,13S,15R,16R,18S)-16-[(2R,3R,4R,5R,6R)-5-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-15-hydroxy-5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-10-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.5734 57.34%
Caco-2 - 0.8879 88.79%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.8143 81.43%
Subcellular localzation Mitochondria 0.7299 72.99%
OATP2B1 inhibitior - 0.8734 87.34%
OATP1B1 inhibitior + 0.8316 83.16%
OATP1B3 inhibitior + 0.9419 94.19%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.5771 57.71%
P-glycoprotein inhibitior + 0.7300 73.00%
P-glycoprotein substrate - 0.5669 56.69%
CYP3A4 substrate + 0.7443 74.43%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8483 84.83%
CYP3A4 inhibition - 0.9265 92.65%
CYP2C9 inhibition - 0.9261 92.61%
CYP2C19 inhibition - 0.9124 91.24%
CYP2D6 inhibition - 0.9583 95.83%
CYP1A2 inhibition - 0.9264 92.64%
CYP2C8 inhibition + 0.6582 65.82%
CYP inhibitory promiscuity - 0.9693 96.93%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.6417 64.17%
Eye corrosion - 0.9922 99.22%
Eye irritation - 0.9114 91.14%
Skin irritation - 0.6168 61.68%
Skin corrosion - 0.9490 94.90%
Ames mutagenesis - 0.8000 80.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7675 76.75%
Micronuclear - 0.9100 91.00%
Hepatotoxicity - 0.7875 78.75%
skin sensitisation - 0.9422 94.22%
Respiratory toxicity + 0.8000 80.00%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.7175 71.75%
Acute Oral Toxicity (c) I 0.7641 76.41%
Estrogen receptor binding + 0.8379 83.79%
Androgen receptor binding + 0.7338 73.38%
Thyroid receptor binding - 0.5662 56.62%
Glucocorticoid receptor binding + 0.5863 58.63%
Aromatase binding + 0.6417 64.17%
PPAR gamma + 0.7504 75.04%
Honey bee toxicity - 0.5422 54.22%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.5200 52.00%
Fish aquatic toxicity + 0.8173 81.73%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.37% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.27% 96.09%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.07% 97.09%
CHEMBL218 P21554 Cannabinoid CB1 receptor 92.19% 96.61%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.49% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.74% 86.33%
CHEMBL5255 O00206 Toll-like receptor 4 87.85% 92.50%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 87.41% 95.50%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 86.20% 93.04%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.87% 97.25%
CHEMBL259 P32245 Melanocortin receptor 4 85.50% 95.38%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.06% 86.92%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.89% 92.94%
CHEMBL226 P30542 Adenosine A1 receptor 83.87% 95.93%
CHEMBL1937 Q92769 Histone deacetylase 2 83.75% 94.75%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 83.38% 95.83%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 82.50% 100.00%
CHEMBL3713062 P10646 Tissue factor pathway inhibitor 81.89% 97.33%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 81.74% 96.21%
CHEMBL233 P35372 Mu opioid receptor 81.35% 97.93%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.86% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.48% 94.45%
CHEMBL1902 P62942 FK506-binding protein 1A 80.48% 97.05%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 80.22% 97.86%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 80.18% 91.24%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Agave utahensis

Cross-Links

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PubChem 44139497
LOTUS LTS0276276
wikiData Q105103073