(1S,2S,3S,5S,8R,9S,10R,11S,12R,13S)-3,12,13-trihydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylic acid

Details

Top
Internal ID 5b4242ef-e19a-46ce-ab2e-4c1d4a2dd9df
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Diterpenoids > C19-gibberellins > C19-gibberellin 6-carboxylic acids
IUPAC Name (1S,2S,3S,5S,8R,9S,10R,11S,12R,13S)-3,12,13-trihydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylic acid
SMILES (Canonical) CC12C3C(C45CC(CC(C4C3(CC(C1O)O)OC2=O)O)C(=C)C5)C(=O)O
SMILES (Isomeric) C[C@]12[C@H]3[C@@H]([C@@]45C[C@@H](C[C@@H]([C@H]4[C@@]3(C[C@@H]([C@@H]1O)O)OC2=O)O)C(=C)C5)C(=O)O
InChI InChI=1S/C19H24O7/c1-7-4-18-5-8(7)3-9(20)12(18)19-6-10(21)14(22)17(2,16(25)26-19)13(19)11(18)15(23)24/h8-14,20-22H,1,3-6H2,2H3,(H,23,24)/t8-,9+,10+,11-,12-,13-,14+,17+,18-,19-/m1/s1
InChI Key FKMJLJSSQHSAEF-WQODXWHISA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C19H24O7
Molecular Weight 364.40 g/mol
Exact Mass 364.15220310 g/mol
Topological Polar Surface Area (TPSA) 124.00 Ų
XlogP -0.50
Atomic LogP (AlogP) 0.08
H-Bond Acceptor 6
H-Bond Donor 4
Rotatable Bonds 1

Synonyms

Top
68062-25-9
Gibbane-1,10-dicarboxylic acid, 2,3,4a,5-tetrahydroxy-1-methyl-8-methylene-, 1,4a-lactone, (1alpha,2beta,3beta,4aalpha,4bbeta,5beta,10beta)-

2D Structure

Top
2D Structure of (1S,2S,3S,5S,8R,9S,10R,11S,12R,13S)-3,12,13-trihydroxy-11-methyl-6-methylidene-16-oxo-15-oxapentacyclo[9.3.2.15,8.01,10.02,8]heptadecane-9-carboxylic acid

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9512 95.12%
Caco-2 - 0.7030 70.30%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability + 0.5714 57.14%
Subcellular localzation Mitochondria 0.7242 72.42%
OATP2B1 inhibitior - 0.8592 85.92%
OATP1B1 inhibitior + 0.8427 84.27%
OATP1B3 inhibitior + 0.9544 95.44%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior - 0.9596 95.96%
P-glycoprotein inhibitior - 0.8810 88.10%
P-glycoprotein substrate - 0.6835 68.35%
CYP3A4 substrate + 0.6415 64.15%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8494 84.94%
CYP3A4 inhibition - 0.7270 72.70%
CYP2C9 inhibition - 0.8638 86.38%
CYP2C19 inhibition - 0.8091 80.91%
CYP2D6 inhibition - 0.9474 94.74%
CYP1A2 inhibition - 0.8832 88.32%
CYP2C8 inhibition - 0.7438 74.38%
CYP inhibitory promiscuity - 0.9646 96.46%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.4559 45.59%
Eye corrosion - 0.9833 98.33%
Eye irritation - 0.9400 94.00%
Skin irritation - 0.5710 57.10%
Skin corrosion - 0.8954 89.54%
Ames mutagenesis - 0.6900 69.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6556 65.56%
Micronuclear - 0.5300 53.00%
Hepatotoxicity + 0.5993 59.93%
skin sensitisation - 0.7707 77.07%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.8750 87.50%
Nephrotoxicity + 0.7079 70.79%
Acute Oral Toxicity (c) IV 0.4370 43.70%
Estrogen receptor binding + 0.7805 78.05%
Androgen receptor binding + 0.6468 64.68%
Thyroid receptor binding + 0.5850 58.50%
Glucocorticoid receptor binding + 0.6983 69.83%
Aromatase binding + 0.6617 66.17%
PPAR gamma - 0.6035 60.35%
Honey bee toxicity - 0.9242 92.42%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 0.9883 98.83%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 88.57% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.83% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.90% 99.23%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 85.15% 85.14%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 85.11% 96.38%
CHEMBL3807 P17706 T-cell protein-tyrosine phosphatase 84.37% 93.00%
CHEMBL340 P08684 Cytochrome P450 3A4 82.12% 91.19%
CHEMBL2581 P07339 Cathepsin D 81.35% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.30% 89.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 80.95% 95.50%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 80.18% 97.14%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Eriobotrya japonica
Lagenaria siceraria

Cross-Links

Top
PubChem 101603121
LOTUS LTS0212806
wikiData Q104996692