7-[6-[[3,4-Dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-1-hydroxyxanthen-9-one

Details

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Internal ID a9f99465-6fd8-4111-9253-83e5970b05b8
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 7-[6-[[3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-1-hydroxyxanthen-9-one
SMILES (Canonical) C1C(C(C(O1)OCC2C(C(C(C(O2)OC3=CC4=C(C=C3)OC5=CC=CC(=C5C4=O)O)O)O)O)O)(CO)O
SMILES (Isomeric) C1C(C(C(O1)OCC2C(C(C(C(O2)OC3=CC4=C(C=C3)OC5=CC=CC(=C5C4=O)O)O)O)O)O)(CO)O
InChI InChI=1S/C24H26O13/c25-8-24(32)9-34-23(21(24)31)33-7-15-18(28)19(29)20(30)22(37-15)35-10-4-5-13-11(6-10)17(27)16-12(26)2-1-3-14(16)36-13/h1-6,15,18-23,25-26,28-32H,7-9H2
InChI Key XXNLZBROTQYGNV-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C24H26O13
Molecular Weight 522.50 g/mol
Exact Mass 522.13734088 g/mol
Topological Polar Surface Area (TPSA) 205.00 Ų
XlogP -0.80
Atomic LogP (AlogP) -1.70
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 6

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 7-[6-[[3,4-Dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-1-hydroxyxanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.4730 47.30%
Caco-2 - 0.9230 92.30%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.6307 63.07%
OATP2B1 inhibitior - 0.5651 56.51%
OATP1B1 inhibitior + 0.9057 90.57%
OATP1B3 inhibitior + 0.9499 94.99%
MATE1 inhibitior - 0.8400 84.00%
OCT2 inhibitior - 0.8000 80.00%
BSEP inhibitior + 0.6528 65.28%
P-glycoprotein inhibitior - 0.5966 59.66%
P-glycoprotein substrate - 0.5887 58.87%
CYP3A4 substrate + 0.6632 66.32%
CYP2C9 substrate - 0.8271 82.71%
CYP2D6 substrate - 0.8606 86.06%
CYP3A4 inhibition - 0.8857 88.57%
CYP2C9 inhibition - 0.9478 94.78%
CYP2C19 inhibition - 0.8458 84.58%
CYP2D6 inhibition - 0.8914 89.14%
CYP1A2 inhibition - 0.9169 91.69%
CYP2C8 inhibition + 0.5702 57.02%
CYP inhibitory promiscuity - 0.8988 89.88%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5534 55.34%
Eye corrosion - 0.9930 99.30%
Eye irritation - 0.9257 92.57%
Skin irritation - 0.8143 81.43%
Skin corrosion - 0.9610 96.10%
Ames mutagenesis + 0.6200 62.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3880 38.80%
Micronuclear - 0.5126 51.26%
Hepatotoxicity - 0.6198 61.98%
skin sensitisation - 0.8709 87.09%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.5625 56.25%
Nephrotoxicity - 0.7603 76.03%
Acute Oral Toxicity (c) III 0.5135 51.35%
Estrogen receptor binding + 0.8085 80.85%
Androgen receptor binding + 0.6243 62.43%
Thyroid receptor binding + 0.5259 52.59%
Glucocorticoid receptor binding + 0.5783 57.83%
Aromatase binding + 0.7767 77.67%
PPAR gamma + 0.8289 82.89%
Honey bee toxicity - 0.7687 76.87%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5900 59.00%
Fish aquatic toxicity + 0.7889 78.89%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.63% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 96.57% 95.56%
CHEMBL1806 P11388 DNA topoisomerase II alpha 96.49% 89.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.66% 94.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.21% 97.09%
CHEMBL2581 P07339 Cathepsin D 94.97% 98.95%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 94.53% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 94.38% 99.23%
CHEMBL241 Q14432 Phosphodiesterase 3A 92.83% 92.94%
CHEMBL1951 P21397 Monoamine oxidase A 92.54% 91.49%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.78% 95.89%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 88.43% 99.15%
CHEMBL3401 O75469 Pregnane X receptor 87.20% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 87.06% 86.33%
CHEMBL226 P30542 Adenosine A1 receptor 86.94% 95.93%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 85.66% 95.83%
CHEMBL1937 Q92769 Histone deacetylase 2 84.54% 94.75%
CHEMBL3192 Q9BY41 Histone deacetylase 8 83.61% 93.99%
CHEMBL4530 P00488 Coagulation factor XIII 83.05% 96.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 82.54% 97.36%
CHEMBL4581 P52732 Kinesin-like protein 1 82.24% 93.18%
CHEMBL220 P22303 Acetylcholinesterase 82.15% 94.45%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Polygala caudata
Polygala wattersii

Cross-Links

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PubChem 162950782
LOTUS LTS0249607
wikiData Q105344114