26-Deoxycimicifugoside

Details

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Internal ID a340f109-4602-4b95-9522-aaa27ce98509
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Cycloartanols and derivatives
IUPAC Name [(1R,1'S,3'R,4S,4'R,5R,5'R,6'R,10'S,12'S,16'R,18'S,21'R)-1,4',6',12',17',17'-hexamethyl-18'-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyspiro[3,6-dioxabicyclo[3.1.0]hexane-4,8'-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docos-13-ene]-3'-yl] acetate
SMILES (Canonical) CC1CC2(C3C(O3)(CO2)C)OC4C1C5(C(CC67CC68CCC(C(C8CC=C7C5(C4)C)(C)C)OC9C(C(C(CO9)O)O)O)OC(=O)C)C
SMILES (Isomeric) C[C@@H]1C[C@@]2([C@H]3[C@](O3)(CO2)C)O[C@@H]4[C@H]1[C@]5([C@@H](C[C@@]67C[C@@]68CC[C@@H](C([C@@H]8CC=C7[C@@]5(C4)C)(C)C)O[C@H]9[C@@H]([C@H]([C@@H](CO9)O)O)O)OC(=O)C)C
InChI InChI=1S/C37H54O10/c1-18-12-37(30-33(6,47-30)17-43-37)46-21-13-32(5)23-9-8-22-31(3,4)24(45-29-28(41)27(40)20(39)15-42-29)10-11-35(22)16-36(23,35)14-25(44-19(2)38)34(32,7)26(18)21/h9,18,20-22,24-30,39-41H,8,10-17H2,1-7H3/t18-,20-,21+,22+,24+,25-,26+,27+,28-,29+,30-,32+,33-,34-,35-,36+,37+/m1/s1
InChI Key PBKJAWKRZRAQQO-YTGDHQJGSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C37H54O10
Molecular Weight 658.80 g/mol
Exact Mass 658.37169792 g/mol
Topological Polar Surface Area (TPSA) 136.00 Ų
XlogP 3.10
Atomic LogP (AlogP) 3.63
H-Bond Acceptor 10
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

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214146-75-5
9H7XN615A3
UNII-9H7XN615A3
7,8-Didehydro-27-deoxyactein
26-DEOXYCIMICIFUGOSIDE, (-)-
beta-D-Xylopyranoside, (3beta,12beta,16beta,23S,24R,25R)-12-(acetyloxy)-16,23:23,26:24,25-triepoxy-9,19-cyclolanost-7-en-3-yl
[(1R,1'S,3'R,4S,4'R,5R,5'R,6'R,10'S,12'S,16'R,18'S,21'R)-1,4',6',12',17',17'-hexamethyl-18'-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyspiro[3,6-dioxabicyclo[3.1.0]hexane-4,8'-9-oxahexacyclo[11.9.0.01,21.04,12.05,10.016,21]docos-13-ene]-3'-yl] acetate
HY-N5088
AKOS040760206
MS-31005
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 26-Deoxycimicifugoside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8998 89.98%
Caco-2 - 0.8365 83.65%
Blood Brain Barrier - 0.8500 85.00%
Human oral bioavailability - 0.5714 57.14%
Subcellular localzation Mitochondria 0.8008 80.08%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8084 80.84%
OATP1B3 inhibitior + 0.9215 92.15%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior - 0.4707 47.07%
P-glycoprotein inhibitior + 0.7718 77.18%
P-glycoprotein substrate + 0.6193 61.93%
CYP3A4 substrate + 0.7398 73.98%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8782 87.82%
CYP3A4 inhibition - 0.9159 91.59%
CYP2C9 inhibition - 0.7537 75.37%
CYP2C19 inhibition - 0.8516 85.16%
CYP2D6 inhibition - 0.9171 91.71%
CYP1A2 inhibition - 0.8445 84.45%
CYP2C8 inhibition + 0.7594 75.94%
CYP inhibitory promiscuity - 0.9533 95.33%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.5465 54.65%
Eye corrosion - 0.9866 98.66%
Eye irritation - 0.9201 92.01%
Skin irritation - 0.6037 60.37%
Skin corrosion - 0.9291 92.91%
Ames mutagenesis - 0.5400 54.00%
Human Ether-a-go-go-Related Gene inhibition - 0.4454 44.54%
Micronuclear - 0.7000 70.00%
Hepatotoxicity - 0.7375 73.75%
skin sensitisation - 0.8506 85.06%
Respiratory toxicity - 0.6000 60.00%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.5789 57.89%
Acute Oral Toxicity (c) III 0.4495 44.95%
Estrogen receptor binding - 0.5729 57.29%
Androgen receptor binding + 0.7695 76.95%
Thyroid receptor binding - 0.5808 58.08%
Glucocorticoid receptor binding + 0.7135 71.35%
Aromatase binding + 0.7026 70.26%
PPAR gamma + 0.6765 67.65%
Honey bee toxicity - 0.6985 69.85%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity + 0.5795 57.95%
Fish aquatic toxicity + 0.9773 97.73%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.61% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.70% 91.11%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 90.45% 98.75%
CHEMBL340 P08684 Cytochrome P450 3A4 89.03% 91.19%
CHEMBL2581 P07339 Cathepsin D 88.33% 98.95%
CHEMBL1994 P08235 Mineralocorticoid receptor 88.02% 100.00%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 87.41% 91.24%
CHEMBL1806 P11388 DNA topoisomerase II alpha 87.28% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.54% 94.45%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.48% 97.09%
CHEMBL5255 O00206 Toll-like receptor 4 85.50% 92.50%
CHEMBL5028 O14672 ADAM10 84.86% 97.50%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.80% 92.94%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 83.99% 97.14%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 83.90% 91.07%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.36% 99.23%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.27% 95.89%
CHEMBL4481 P35228 Nitric oxide synthase, inducible 82.60% 94.80%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.81% 86.33%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 81.33% 82.69%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 80.42% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.08% 94.00%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.03% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Actaea asiatica
Actaea cimicifuga
Actaea dahurica
Actaea racemosa
Actaea simplex

Cross-Links

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PubChem 72941763
NPASS NPC228119
LOTUS LTS0102172
wikiData Q27272561