methyl (4S,5E,6S)-4-[2-[2-(3,4-dimethoxyphenyl)ethoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

Details

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Internal ID ddf0b21b-8a87-4566-b769-71381e933345
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides
IUPAC Name methyl (4S,5E,6S)-4-[2-[2-(3,4-dimethoxyphenyl)ethoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate
SMILES (Canonical) CC=C1C(C(=COC1OC2C(C(C(C(O2)CO)O)O)O)C(=O)OC)CC(=O)OCCC3=CC(=C(C=C3)OC)OC
SMILES (Isomeric) C/C=C/1\[C@@H](C(=CO[C@H]1O[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)C(=O)OC)CC(=O)OCCC3=CC(=C(C=C3)OC)OC
InChI InChI=1S/C27H36O13/c1-5-15-16(11-21(29)37-9-8-14-6-7-18(34-2)19(10-14)35-3)17(25(33)36-4)13-38-26(15)40-27-24(32)23(31)22(30)20(12-28)39-27/h5-7,10,13,16,20,22-24,26-28,30-32H,8-9,11-12H2,1-4H3/b15-5+/t16-,20+,22+,23-,24+,26-,27-/m0/s1
InChI Key MXXTUSVIMMILLV-OETOMCIHSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C27H36O13
Molecular Weight 568.60 g/mol
Exact Mass 568.21559120 g/mol
Topological Polar Surface Area (TPSA) 180.00 Ų
XlogP 0.20
Atomic LogP (AlogP) -0.03
H-Bond Acceptor 13
H-Bond Donor 4
Rotatable Bonds 11

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (4S,5E,6S)-4-[2-[2-(3,4-dimethoxyphenyl)ethoxy]-2-oxoethyl]-5-ethylidene-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-4H-pyran-3-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.6917 69.17%
Caco-2 - 0.8578 85.78%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7714 77.14%
Subcellular localzation Mitochondria 0.8011 80.11%
OATP2B1 inhibitior - 0.8650 86.50%
OATP1B1 inhibitior + 0.7492 74.92%
OATP1B3 inhibitior + 0.9087 90.87%
MATE1 inhibitior - 0.9012 90.12%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior + 0.7922 79.22%
P-glycoprotein inhibitior + 0.6457 64.57%
P-glycoprotein substrate + 0.6205 62.05%
CYP3A4 substrate + 0.6870 68.70%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8721 87.21%
CYP3A4 inhibition - 0.7930 79.30%
CYP2C9 inhibition - 0.8065 80.65%
CYP2C19 inhibition - 0.7079 70.79%
CYP2D6 inhibition - 0.9012 90.12%
CYP1A2 inhibition - 0.7311 73.11%
CYP2C8 inhibition + 0.8566 85.66%
CYP inhibitory promiscuity - 0.8867 88.67%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9600 96.00%
Carcinogenicity (trinary) Non-required 0.7134 71.34%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.9410 94.10%
Skin irritation - 0.8242 82.42%
Skin corrosion - 0.9603 96.03%
Ames mutagenesis + 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7460 74.60%
Micronuclear - 0.7900 79.00%
Hepatotoxicity - 0.7966 79.66%
skin sensitisation - 0.8471 84.71%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.7222 72.22%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.7650 76.50%
Acute Oral Toxicity (c) III 0.6137 61.37%
Estrogen receptor binding + 0.8229 82.29%
Androgen receptor binding + 0.6410 64.10%
Thyroid receptor binding + 0.5339 53.39%
Glucocorticoid receptor binding + 0.7904 79.04%
Aromatase binding - 0.5000 50.00%
PPAR gamma + 0.7047 70.47%
Honey bee toxicity - 0.7497 74.97%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6700 67.00%
Fish aquatic toxicity + 0.9227 92.27%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.45% 96.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 95.36% 86.33%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 95.08% 86.92%
CHEMBL3060 Q9Y345 Glycine transporter 2 94.58% 99.17%
CHEMBL2581 P07339 Cathepsin D 90.26% 98.95%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.18% 91.11%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 89.90% 96.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.96% 95.89%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.82% 94.45%
CHEMBL3401 O75469 Pregnane X receptor 86.27% 94.73%
CHEMBL5163 Q9NY46 Sodium channel protein type III alpha subunit 84.30% 96.90%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 83.25% 95.89%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 83.10% 94.00%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.78% 90.71%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.84% 95.83%
CHEMBL1806 P11388 DNA topoisomerase II alpha 81.78% 89.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.43% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Ligustrum lucidum

Cross-Links

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PubChem 10531060
LOTUS LTS0032657
wikiData Q105174662