2,5,6-Trihydroxy-1-methoxy-4-(2-methylbut-3-en-2-yl)xanthen-9-one

Details

Top
Internal ID b25d16f8-3961-4593-af39-10087ed5f66c
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 2,5,6-trihydroxy-1-methoxy-4-(2-methylbut-3-en-2-yl)xanthen-9-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C19H18O6/c1-5-19(2,3)10-8-12(21)18(24-4)13-14(22)9-6-7-11(20)15(23)16(9)25-17(10)13/h5-8,20-21,23H,1H2,2-4H3
InChI Key KRAOFWIFGJABLE-UHFFFAOYSA-N
Popularity 7 references in papers

Physical and Chemical Properties

Top
Molecular Formula C19H18O6
Molecular Weight 342.30 g/mol
Exact Mass 342.11033829 g/mol
Topological Polar Surface Area (TPSA) 96.20 Ų
XlogP 3.80
Atomic LogP (AlogP) 3.54
H-Bond Acceptor 6
H-Bond Donor 3
Rotatable Bonds 3

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 2,5,6-Trihydroxy-1-methoxy-4-(2-methylbut-3-en-2-yl)xanthen-9-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9612 96.12%
Caco-2 + 0.6611 66.11%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Mitochondria 0.6834 68.34%
OATP2B1 inhibitior - 0.5634 56.34%
OATP1B1 inhibitior + 0.9006 90.06%
OATP1B3 inhibitior + 0.9792 97.92%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.5362 53.62%
P-glycoprotein inhibitior - 0.5736 57.36%
P-glycoprotein substrate - 0.7842 78.42%
CYP3A4 substrate + 0.5555 55.55%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8153 81.53%
CYP3A4 inhibition + 0.6457 64.57%
CYP2C9 inhibition - 0.8685 86.85%
CYP2C19 inhibition + 0.5688 56.88%
CYP2D6 inhibition - 0.7927 79.27%
CYP1A2 inhibition + 0.7388 73.88%
CYP2C8 inhibition + 0.5543 55.43%
CYP inhibitory promiscuity - 0.5604 56.04%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5795 57.95%
Eye corrosion - 0.9843 98.43%
Eye irritation + 0.7684 76.84%
Skin irritation - 0.7501 75.01%
Skin corrosion - 0.9168 91.68%
Ames mutagenesis + 0.6636 66.36%
Human Ether-a-go-go-Related Gene inhibition - 0.4178 41.78%
Micronuclear + 0.6600 66.00%
Hepatotoxicity + 0.7500 75.00%
skin sensitisation - 0.7943 79.43%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.7889 78.89%
Mitochondrial toxicity + 0.5250 52.50%
Nephrotoxicity - 0.7603 76.03%
Acute Oral Toxicity (c) III 0.5872 58.72%
Estrogen receptor binding + 0.8188 81.88%
Androgen receptor binding + 0.7256 72.56%
Thyroid receptor binding + 0.5787 57.87%
Glucocorticoid receptor binding + 0.8589 85.89%
Aromatase binding + 0.8422 84.22%
PPAR gamma + 0.7715 77.15%
Honey bee toxicity - 0.8539 85.39%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5100 51.00%
Fish aquatic toxicity + 0.9846 98.46%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.51% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.24% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.99% 94.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.33% 94.45%
CHEMBL2085 P14174 Macrophage migration inhibitory factor 92.43% 80.78%
CHEMBL1806 P11388 DNA topoisomerase II alpha 91.76% 89.00%
CHEMBL1163101 O75460 Serine/threonine-protein kinase/endoribonuclease IRE1 91.67% 98.11%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 91.50% 89.34%
CHEMBL3401 O75469 Pregnane X receptor 90.40% 94.73%
CHEMBL1293249 Q13887 Kruppel-like factor 5 88.91% 86.33%
CHEMBL2581 P07339 Cathepsin D 88.60% 98.95%
CHEMBL1951 P21397 Monoamine oxidase A 88.48% 91.49%
CHEMBL3192 Q9BY41 Histone deacetylase 8 85.09% 93.99%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 84.16% 99.15%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.08% 99.23%
CHEMBL241 Q14432 Phosphodiesterase 3A 82.64% 92.94%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 82.10% 93.65%
CHEMBL3194 P02766 Transthyretin 81.09% 90.71%
CHEMBL4530 P00488 Coagulation factor XIII 80.97% 96.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.76% 99.17%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 80.63% 85.30%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 80.36% 89.62%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia dulcis
Garcinia subelliptica
Garcinia xanthochymus

Cross-Links

Top
PubChem 9916415
LOTUS LTS0010010
wikiData Q105144903