25-O-Acetylcimigenol xyloside

Details

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Internal ID 38727abd-8ce9-4c41-b26c-f7f5b5b1f285
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins > Cucurbitacin glycosides
IUPAC Name 2-[(1S,2R,3S,4R,7R,9S,12R,14S,17R,18R,19R,21R,22S)-2-hydroxy-3,8,8,17,19-pentamethyl-9-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxy-23,24-dioxaheptacyclo[19.2.1.01,18.03,17.04,14.07,12.012,14]tetracosan-22-yl]propan-2-yl acetate
SMILES (Canonical) CC1CC2C(OC3(C1C4(CCC56CC57CCC(C(C7CCC6C4(C3O)C)(C)C)OC8C(C(C(CO8)O)O)O)C)O2)C(C)(C)OC(=O)C
SMILES (Isomeric) C[C@@H]1C[C@@H]2[C@H](O[C@]3([C@H]1[C@]4(CC[C@@]56C[C@@]57CC[C@@H](C([C@@H]7CC[C@H]6[C@@]4([C@H]3O)C)(C)C)O[C@H]8[C@@H]([C@H]([C@@H](CO8)O)O)O)C)O2)C(C)(C)OC(=O)C
InChI InChI=1S/C37H58O10/c1-18-15-21-28(32(5,6)45-19(2)38)47-37(46-21)27(18)33(7)13-14-36-17-35(36)12-11-24(44-29-26(41)25(40)20(39)16-43-29)31(3,4)22(35)9-10-23(36)34(33,8)30(37)42/h18,20-30,39-42H,9-17H2,1-8H3/t18-,20-,21-,22+,23+,24+,25+,26-,27-,28+,29+,30-,33-,34-,35-,36+,37+/m1/s1
InChI Key NNFJPOSVDKIWPO-GEOUWNACSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C37H58O10
Molecular Weight 662.80 g/mol
Exact Mass 662.40299804 g/mol
Topological Polar Surface Area (TPSA) 144.00 Ų
XlogP 4.30
Atomic LogP (AlogP) 3.69
H-Bond Acceptor 10
H-Bond Donor 4
Rotatable Bonds 4

Synonyms

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Cimigenoside, 25-acetate
915XS7T0OS
UNII-915XS7T0OS
27994-12-3
25-O-Acetylcimigenol-3-o-beta-D-xylopyranoside
beta-D-Xylopyranoside, (3beta,15alpha,16alpha,23R,24S)-25-(acetyloxy)-16,23:16,24-diepoxy-15-hydroxy-9,19-cyclolanostan-3-yl
25-O-Acetylcimigenol-3-o-beta-D-xyloside (24S) (constituent of Black cohosh) [DSC]
HY-N10700
25-O-Acetylcimigenol-3-O-beta-D-xyloside
CS-0634320
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 25-O-Acetylcimigenol xyloside

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8059 80.59%
Caco-2 - 0.8527 85.27%
Blood Brain Barrier - 0.7250 72.50%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.7464 74.64%
OATP2B1 inhibitior - 0.5870 58.70%
OATP1B1 inhibitior + 0.8511 85.11%
OATP1B3 inhibitior + 0.9334 93.34%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.6750 67.50%
BSEP inhibitior - 0.5693 56.93%
P-glycoprotein inhibitior + 0.7527 75.27%
P-glycoprotein substrate + 0.5740 57.40%
CYP3A4 substrate + 0.7262 72.62%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8731 87.31%
CYP3A4 inhibition - 0.8545 85.45%
CYP2C9 inhibition - 0.7963 79.63%
CYP2C19 inhibition - 0.8638 86.38%
CYP2D6 inhibition - 0.9430 94.30%
CYP1A2 inhibition - 0.8662 86.62%
CYP2C8 inhibition + 0.7289 72.89%
CYP inhibitory promiscuity - 0.9663 96.63%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.6383 63.83%
Eye corrosion - 0.9892 98.92%
Eye irritation - 0.9150 91.50%
Skin irritation - 0.6519 65.19%
Skin corrosion - 0.9323 93.23%
Ames mutagenesis - 0.5300 53.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7082 70.82%
Micronuclear - 0.7900 79.00%
Hepatotoxicity - 0.7216 72.16%
skin sensitisation - 0.8895 88.95%
Respiratory toxicity - 0.6000 60.00%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.6625 66.25%
Nephrotoxicity - 0.6859 68.59%
Acute Oral Toxicity (c) I 0.4074 40.74%
Estrogen receptor binding + 0.5625 56.25%
Androgen receptor binding + 0.7551 75.51%
Thyroid receptor binding - 0.5608 56.08%
Glucocorticoid receptor binding + 0.6254 62.54%
Aromatase binding + 0.7079 70.79%
PPAR gamma + 0.6461 64.61%
Honey bee toxicity - 0.6478 64.78%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity + 0.5300 53.00%
Fish aquatic toxicity + 0.9378 93.78%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 99.10% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.97% 91.11%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 96.54% 96.77%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.78% 96.09%
CHEMBL1293267 Q9HC97 G-protein coupled receptor 35 93.17% 89.34%
CHEMBL241 Q14432 Phosphodiesterase 3A 92.20% 92.94%
CHEMBL340 P08684 Cytochrome P450 3A4 91.65% 91.19%
CHEMBL3145 P42338 PI3-kinase p110-beta subunit 91.53% 98.75%
CHEMBL2581 P07339 Cathepsin D 90.73% 98.95%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 90.28% 96.95%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 89.63% 92.88%
CHEMBL3137262 O60341 LSD1/CoREST complex 89.57% 97.09%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 89.09% 97.14%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 87.77% 85.14%
CHEMBL218 P21554 Cannabinoid CB1 receptor 87.16% 96.61%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 87.15% 91.24%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 86.90% 82.69%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 86.68% 95.71%
CHEMBL2413 P32246 C-C chemokine receptor type 1 86.56% 89.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.20% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.14% 100.00%
CHEMBL325 Q13547 Histone deacetylase 1 84.81% 95.92%
CHEMBL1902 P62942 FK506-binding protein 1A 84.51% 97.05%
CHEMBL1293249 Q13887 Kruppel-like factor 5 83.46% 86.33%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 83.35% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.32% 95.89%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 82.86% 98.99%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 82.76% 95.56%
CHEMBL1914 P06276 Butyrylcholinesterase 82.55% 95.00%
CHEMBL5255 O00206 Toll-like receptor 4 82.11% 92.50%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 81.97% 100.00%
CHEMBL2007 P16234 Platelet-derived growth factor receptor alpha 81.83% 91.07%
CHEMBL3267 P48736 PI3-kinase p110-gamma subunit 81.22% 95.71%
CHEMBL3837 P07711 Cathepsin L 80.29% 96.61%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Actaea cimicifuga
Actaea dahurica
Actaea pachypoda
Actaea racemosa
Actaea simplex
Actaea yunnanensis

Cross-Links

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PubChem 91826996
NPASS NPC278782
LOTUS LTS0217527
wikiData Q27271378