2,5-Dihydroxy-1-methoxy-4-(2-methylbut-3-en-2-yl)xanthen-9-one

Details

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Internal ID ddea8279-c8b7-4366-a2a0-6da355858bd4
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 2,5-dihydroxy-1-methoxy-4-(2-methylbut-3-en-2-yl)xanthen-9-one
SMILES (Canonical) CC(C)(C=C)C1=CC(=C(C2=C1OC3=C(C2=O)C=CC=C3O)OC)O
SMILES (Isomeric) CC(C)(C=C)C1=CC(=C(C2=C1OC3=C(C2=O)C=CC=C3O)OC)O
InChI InChI=1S/C19H18O5/c1-5-19(2,3)11-9-13(21)18(23-4)14-15(22)10-7-6-8-12(20)16(10)24-17(11)14/h5-9,20-21H,1H2,2-4H3
InChI Key UVQCHQLUHFTVDQ-UHFFFAOYSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C19H18O5
Molecular Weight 326.30 g/mol
Exact Mass 326.11542367 g/mol
Topological Polar Surface Area (TPSA) 76.00 Ų
XlogP 4.20
Atomic LogP (AlogP) 3.83
H-Bond Acceptor 5
H-Bond Donor 2
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2,5-Dihydroxy-1-methoxy-4-(2-methylbut-3-en-2-yl)xanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9774 97.74%
Caco-2 + 0.6146 61.46%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability + 0.5714 57.14%
Subcellular localzation Mitochondria 0.6866 68.66%
OATP2B1 inhibitior - 0.7112 71.12%
OATP1B1 inhibitior + 0.9224 92.24%
OATP1B3 inhibitior + 0.9721 97.21%
MATE1 inhibitior - 0.9200 92.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.5917 59.17%
P-glycoprotein inhibitior - 0.5226 52.26%
P-glycoprotein substrate - 0.8142 81.42%
CYP3A4 substrate + 0.5969 59.69%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8063 80.63%
CYP3A4 inhibition + 0.7025 70.25%
CYP2C9 inhibition - 0.7557 75.57%
CYP2C19 inhibition + 0.7338 73.38%
CYP2D6 inhibition - 0.6977 69.77%
CYP1A2 inhibition + 0.7933 79.33%
CYP2C8 inhibition + 0.5863 58.63%
CYP inhibitory promiscuity + 0.6121 61.21%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5566 55.66%
Eye corrosion - 0.9838 98.38%
Eye irritation + 0.7895 78.95%
Skin irritation - 0.7557 75.57%
Skin corrosion - 0.9369 93.69%
Ames mutagenesis + 0.5900 59.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5099 50.99%
Micronuclear + 0.6600 66.00%
Hepatotoxicity + 0.6428 64.28%
skin sensitisation - 0.8041 80.41%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.7667 76.67%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.7439 74.39%
Acute Oral Toxicity (c) III 0.5884 58.84%
Estrogen receptor binding + 0.8056 80.56%
Androgen receptor binding + 0.6306 63.06%
Thyroid receptor binding + 0.6036 60.36%
Glucocorticoid receptor binding + 0.8469 84.69%
Aromatase binding + 0.8495 84.95%
PPAR gamma + 0.8277 82.77%
Honey bee toxicity - 0.8289 82.89%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.9820 98.20%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.34% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.58% 95.56%
CHEMBL3401 O75469 Pregnane X receptor 94.83% 94.73%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 94.34% 94.00%
CHEMBL3192 Q9BY41 Histone deacetylase 8 93.86% 93.99%
CHEMBL2581 P07339 Cathepsin D 92.76% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.22% 89.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.94% 86.33%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.46% 99.23%
CHEMBL2085 P14174 Macrophage migration inhibitory factor 87.99% 80.78%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.71% 94.45%
CHEMBL2535 P11166 Glucose transporter 85.83% 98.75%
CHEMBL1907 P15144 Aminopeptidase N 85.42% 93.31%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.24% 99.17%
CHEMBL1937 Q92769 Histone deacetylase 2 81.84% 94.75%
CHEMBL4530 P00488 Coagulation factor XIII 81.70% 96.00%
CHEMBL3959 P16083 Quinone reductase 2 80.62% 89.49%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 80.53% 93.65%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia vilersiana
Garcinia xanthochymus

Cross-Links

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PubChem 15489701
LOTUS LTS0269941
wikiData Q105280040