(2R,4S)-6,11-dihydroxy-2-methyl-4-(2-methylprop-1-enyl)-2-[(E)-2-(1,4,5-trihydroxy-9-oxoxanthen-3-yl)ethenyl]-3,4-dihydropyrano[3,2-c]xanthen-7-one

Details

Top
Internal ID 558a93ab-37e9-4f83-a4d9-1f925d2154de
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones > Pyranoxanthones
IUPAC Name (2R,4S)-6,11-dihydroxy-2-methyl-4-(2-methylprop-1-enyl)-2-[(E)-2-(1,4,5-trihydroxy-9-oxoxanthen-3-yl)ethenyl]-3,4-dihydropyrano[3,2-c]xanthen-7-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C36H28O10/c1-16(2)12-18-15-36(3,46-33-21(18)14-25(40)27-30(43)20-7-5-9-23(38)32(20)45-35(27)33)11-10-17-13-24(39)26-29(42)19-6-4-8-22(37)31(19)44-34(26)28(17)41/h4-14,18,37-41H,15H2,1-3H3/b11-10+/t18-,36+/m1/s1
InChI Key FZZGQDIWKXCOQI-ZOMYVUIUSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C36H28O10
Molecular Weight 620.60 g/mol
Exact Mass 620.16824709 g/mol
Topological Polar Surface Area (TPSA) 163.00 Ų
XlogP 7.50
Atomic LogP (AlogP) 7.04
H-Bond Acceptor 10
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2R,4S)-6,11-dihydroxy-2-methyl-4-(2-methylprop-1-enyl)-2-[(E)-2-(1,4,5-trihydroxy-9-oxoxanthen-3-yl)ethenyl]-3,4-dihydropyrano[3,2-c]xanthen-7-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9811 98.11%
Caco-2 - 0.8465 84.65%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.7191 71.91%
OATP2B1 inhibitior + 0.5735 57.35%
OATP1B1 inhibitior + 0.8963 89.63%
OATP1B3 inhibitior + 0.9655 96.55%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior + 0.9913 99.13%
P-glycoprotein inhibitior + 0.7999 79.99%
P-glycoprotein substrate + 0.6137 61.37%
CYP3A4 substrate + 0.7029 70.29%
CYP2C9 substrate - 0.5773 57.73%
CYP2D6 substrate - 0.8161 81.61%
CYP3A4 inhibition - 0.6990 69.90%
CYP2C9 inhibition + 0.6280 62.80%
CYP2C19 inhibition + 0.5248 52.48%
CYP2D6 inhibition - 0.8387 83.87%
CYP1A2 inhibition + 0.5069 50.69%
CYP2C8 inhibition + 0.6568 65.68%
CYP inhibitory promiscuity - 0.5820 58.20%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5007 50.07%
Eye corrosion - 0.9927 99.27%
Eye irritation - 0.8701 87.01%
Skin irritation - 0.7217 72.17%
Skin corrosion - 0.9321 93.21%
Ames mutagenesis + 0.6746 67.46%
Human Ether-a-go-go-Related Gene inhibition + 0.7216 72.16%
Micronuclear - 0.5100 51.00%
Hepatotoxicity - 0.5631 56.31%
skin sensitisation - 0.6406 64.06%
Respiratory toxicity + 0.7222 72.22%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.6942 69.42%
Acute Oral Toxicity (c) III 0.6214 62.14%
Estrogen receptor binding + 0.8555 85.55%
Androgen receptor binding + 0.7939 79.39%
Thyroid receptor binding + 0.5844 58.44%
Glucocorticoid receptor binding + 0.8133 81.33%
Aromatase binding + 0.6851 68.51%
PPAR gamma + 0.7601 76.01%
Honey bee toxicity - 0.6204 62.04%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.9855 98.55%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.77% 91.11%
CHEMBL1806 P11388 DNA topoisomerase II alpha 97.76% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 97.45% 94.45%
CHEMBL4224 P49759 Dual specificty protein kinase CLK1 96.61% 85.30%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 96.56% 95.56%
CHEMBL1937 Q92769 Histone deacetylase 2 95.98% 94.75%
CHEMBL2581 P07339 Cathepsin D 94.65% 98.95%
CHEMBL3192 Q9BY41 Histone deacetylase 8 94.25% 93.99%
CHEMBL1951 P21397 Monoamine oxidase A 92.02% 91.49%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 90.83% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.89% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 87.97% 95.89%
CHEMBL3401 O75469 Pregnane X receptor 87.17% 94.73%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 86.91% 85.14%
CHEMBL1994 P08235 Mineralocorticoid receptor 85.10% 100.00%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 84.51% 96.09%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 83.40% 92.62%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 81.52% 94.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 80.54% 92.94%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia livingstonei

Cross-Links

Top
PubChem 163186351
LOTUS LTS0173869
wikiData Q105005261