(2S,3R,4S,5R,6R)-2-[(2S,3R,5R)-5-[(1R,2S,4S,6S,7S,8R,9S,12S,13S,16S,18S)-6,16-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-3-methyloxolan-2-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

Details

Top
Internal ID c58babe5-0d93-402c-8ac5-27b13451ad2f
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (2S,3R,4S,5R,6R)-2-[(2S,3R,5R)-5-[(1R,2S,4S,6S,7S,8R,9S,12S,13S,16S,18S)-6,16-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-3-methyloxolan-2-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C33H54O10/c1-15-11-24(41-29(15)42-30-28(38)27(37)26(36)23(14-34)40-30)33(39)16(2)25-22(43-33)13-21-19-6-5-17-12-18(35)7-9-31(17,3)20(19)8-10-32(21,25)4/h15-30,34-39H,5-14H2,1-4H3/t15-,16+,17+,18+,19-,20+,21+,22+,23-,24-,25+,26+,27+,28-,29+,30+,31+,32+,33+/m1/s1
InChI Key DHQWUUFYWUJBRL-TZYCKRNOSA-N
Popularity 2 references in papers

Physical and Chemical Properties

Top
Molecular Formula C33H54O10
Molecular Weight 610.80 g/mol
Exact Mass 610.37169792 g/mol
Topological Polar Surface Area (TPSA) 158.00 Ų
XlogP 3.40
Atomic LogP (AlogP) 1.91
H-Bond Acceptor 10
H-Bond Donor 6
Rotatable Bonds 4

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of (2S,3R,4S,5R,6R)-2-[(2S,3R,5R)-5-[(1R,2S,4S,6S,7S,8R,9S,12S,13S,16S,18S)-6,16-dihydroxy-7,9,13-trimethyl-5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosan-6-yl]-3-methyloxolan-2-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6576 65.76%
Caco-2 - 0.8625 86.25%
Blood Brain Barrier - 0.7000 70.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.7056 70.56%
OATP2B1 inhibitior - 0.5811 58.11%
OATP1B1 inhibitior + 0.8634 86.34%
OATP1B3 inhibitior + 0.9425 94.25%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6500 65.00%
BSEP inhibitior - 0.8915 89.15%
P-glycoprotein inhibitior + 0.6270 62.70%
P-glycoprotein substrate - 0.6063 60.63%
CYP3A4 substrate + 0.7449 74.49%
CYP2C9 substrate - 0.8016 80.16%
CYP2D6 substrate - 0.8288 82.88%
CYP3A4 inhibition - 0.9014 90.14%
CYP2C9 inhibition - 0.9101 91.01%
CYP2C19 inhibition - 0.9269 92.69%
CYP2D6 inhibition - 0.9542 95.42%
CYP1A2 inhibition - 0.9163 91.63%
CYP2C8 inhibition + 0.6099 60.99%
CYP inhibitory promiscuity - 0.9314 93.14%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6405 64.05%
Eye corrosion - 0.9911 99.11%
Eye irritation - 0.9285 92.85%
Skin irritation - 0.6408 64.08%
Skin corrosion - 0.9482 94.82%
Ames mutagenesis - 0.7186 71.86%
Human Ether-a-go-go-Related Gene inhibition + 0.6906 69.06%
Micronuclear - 0.8800 88.00%
Hepatotoxicity - 0.7945 79.45%
skin sensitisation - 0.9392 93.92%
Respiratory toxicity + 0.8111 81.11%
Reproductive toxicity + 0.7111 71.11%
Mitochondrial toxicity + 0.5125 51.25%
Nephrotoxicity - 0.8309 83.09%
Acute Oral Toxicity (c) I 0.6893 68.93%
Estrogen receptor binding + 0.6254 62.54%
Androgen receptor binding + 0.6413 64.13%
Thyroid receptor binding - 0.5819 58.19%
Glucocorticoid receptor binding - 0.5163 51.63%
Aromatase binding + 0.6725 67.25%
PPAR gamma + 0.5982 59.82%
Honey bee toxicity - 0.5907 59.07%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity - 0.5146 51.46%
Fish aquatic toxicity + 0.8334 83.34%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL220 P22303 Acetylcholinesterase 98.51% 94.45%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.69% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 95.25% 91.11%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 95.12% 92.86%
CHEMBL226 P30542 Adenosine A1 receptor 94.48% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.65% 97.09%
CHEMBL204 P00734 Thrombin 93.65% 96.01%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 92.39% 89.05%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.79% 100.00%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 91.46% 96.21%
CHEMBL218 P21554 Cannabinoid CB1 receptor 88.46% 96.61%
CHEMBL1871 P10275 Androgen Receptor 88.03% 96.43%
CHEMBL237 P41145 Kappa opioid receptor 86.34% 98.10%
CHEMBL233 P35372 Mu opioid receptor 86.29% 97.93%
CHEMBL5255 O00206 Toll-like receptor 4 86.17% 92.50%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 86.04% 100.00%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 85.77% 95.50%
CHEMBL241 Q14432 Phosphodiesterase 3A 84.73% 92.94%
CHEMBL2996 Q05655 Protein kinase C delta 83.77% 97.79%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 83.52% 95.36%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 82.86% 95.89%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 81.98% 95.83%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.96% 95.89%
CHEMBL2140 P48775 Tryptophan 2,3-dioxygenase 80.68% 98.46%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 80.30% 97.86%
CHEMBL4581 P52732 Kinesin-like protein 1 80.22% 93.18%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Agave americana

Cross-Links

Top
PubChem 162926487
LOTUS LTS0253521
wikiData Q104980776