(2R,3R,4R,5R,6S)-2-[[(1R,3R,8S,9S,10R,13S,14S,16S,17R)-17-[(2S,3S)-3-hydroxy-6-methylheptan-2-yl]-10,13-dimethyl-16-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-6-methyloxane-3,4,5-triol

Details

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Internal ID 7c84fa40-e671-4f69-90bc-04639ad5d2ae
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides
IUPAC Name (2R,3R,4R,5R,6S)-2-[[(1R,3R,8S,9S,10R,13S,14S,16S,17R)-17-[(2S,3S)-3-hydroxy-6-methylheptan-2-yl]-10,13-dimethyl-16-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-6-methyloxane-3,4,5-triol
SMILES (Canonical) CC1C(C(C(C(O1)OC2CC(C3(C4CCC5(C(C4CC=C3C2)CC(C5C(C)C(CCC(C)C)O)OC6C(C(C(C(O6)CO)O)O)O)C)C)OC7C(C(C(C(O7)C)O)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@H]2C[C@H]([C@@]3([C@H]4CC[C@]5([C@H]([C@@H]4CC=C3C2)C[C@@H]([C@@H]5[C@H](C)[C@H](CCC(C)C)O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O)C)C)O[C@H]7[C@@H]([C@@H]([C@H]([C@@H](O7)C)O)O)O)O)O)O
InChI InChI=1S/C45H76O17/c1-18(2)8-11-27(47)19(3)31-28(60-43-40(56)37(53)34(50)29(17-46)61-43)16-26-24-10-9-22-14-23(59-41-38(54)35(51)32(48)20(4)57-41)15-30(45(22,7)25(24)12-13-44(26,31)6)62-42-39(55)36(52)33(49)21(5)58-42/h9,18-21,23-43,46-56H,8,10-17H2,1-7H3/t19-,20+,21+,23-,24-,25+,26+,27+,28+,29-,30-,31+,32+,33+,34-,35-,36-,37+,38-,39-,40-,41+,42+,43-,44+,45+/m1/s1
InChI Key JLWOFVZAHKQROF-NCZKWWBUSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C45H76O17
Molecular Weight 889.10 g/mol
Exact Mass 888.50825095 g/mol
Topological Polar Surface Area (TPSA) 278.00 Ų
XlogP 0.90
Atomic LogP (AlogP) -0.17
H-Bond Acceptor 17
H-Bond Donor 11
Rotatable Bonds 12

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4R,5R,6S)-2-[[(1R,3R,8S,9S,10R,13S,14S,16S,17R)-17-[(2S,3S)-3-hydroxy-6-methylheptan-2-yl]-10,13-dimethyl-16-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-1-[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxy-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8256 82.56%
Caco-2 - 0.8772 87.72%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.7571 75.71%
Subcellular localzation Mitochondria 0.7773 77.73%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8842 88.42%
OATP1B3 inhibitior - 0.2330 23.30%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.6000 60.00%
BSEP inhibitior - 0.5563 55.63%
P-glycoprotein inhibitior + 0.7314 73.14%
P-glycoprotein substrate + 0.6092 60.92%
CYP3A4 substrate + 0.7315 73.15%
CYP2C9 substrate - 0.8025 80.25%
CYP2D6 substrate - 0.8264 82.64%
CYP3A4 inhibition - 0.9133 91.33%
CYP2C9 inhibition - 0.8534 85.34%
CYP2C19 inhibition - 0.9260 92.60%
CYP2D6 inhibition - 0.9372 93.72%
CYP1A2 inhibition - 0.8969 89.69%
CYP2C8 inhibition + 0.6867 68.67%
CYP inhibitory promiscuity - 0.9163 91.63%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6139 61.39%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9130 91.30%
Skin irritation - 0.5214 52.14%
Skin corrosion - 0.9440 94.40%
Ames mutagenesis - 0.8407 84.07%
Human Ether-a-go-go-Related Gene inhibition + 0.7518 75.18%
Micronuclear - 0.8400 84.00%
Hepatotoxicity - 0.7500 75.00%
skin sensitisation - 0.9037 90.37%
Respiratory toxicity + 0.7333 73.33%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity - 0.5000 50.00%
Nephrotoxicity - 0.9496 94.96%
Acute Oral Toxicity (c) III 0.5437 54.37%
Estrogen receptor binding + 0.7633 76.33%
Androgen receptor binding + 0.7167 71.67%
Thyroid receptor binding - 0.5624 56.24%
Glucocorticoid receptor binding - 0.5106 51.06%
Aromatase binding + 0.6366 63.66%
PPAR gamma + 0.7126 71.26%
Honey bee toxicity - 0.6780 67.80%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6400 64.00%
Fish aquatic toxicity + 0.9410 94.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 98.93% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 98.79% 95.93%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.05% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.15% 97.09%
CHEMBL2581 P07339 Cathepsin D 94.91% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.51% 85.14%
CHEMBL253 P34972 Cannabinoid CB2 receptor 94.14% 97.25%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 93.99% 95.89%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.00% 89.00%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.80% 100.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.46% 86.33%
CHEMBL3359 P21462 Formyl peptide receptor 1 90.05% 93.56%
CHEMBL4227 P25090 Lipoxin A4 receptor 88.70% 100.00%
CHEMBL2094135 Q96BI3 Gamma-secretase 88.04% 98.05%
CHEMBL5103 Q969S8 Histone deacetylase 10 86.98% 90.08%
CHEMBL2335 P42785 Lysosomal Pro-X carboxypeptidase 85.95% 100.00%
CHEMBL4073 P09237 Matrix metalloproteinase 7 85.21% 97.56%
CHEMBL3714130 P46095 G-protein coupled receptor 6 84.10% 97.36%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 83.57% 89.67%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.34% 95.89%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 82.13% 97.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 81.98% 94.45%
CHEMBL1937 Q92769 Histone deacetylase 2 81.42% 94.75%
CHEMBL3401 O75469 Pregnane X receptor 80.76% 94.73%
CHEMBL237 P41145 Kappa opioid receptor 80.17% 98.10%
CHEMBL221 P23219 Cyclooxygenase-1 80.15% 90.17%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Allium macleanii

Cross-Links

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PubChem 162949198
LOTUS LTS0003597
wikiData Q105131166