2-(Hydroxymethyl)-5-(1-hydroxypentyl)pyrrolidine-3,4-diol

Details

Top
Internal ID cf4fc050-e77b-4f12-9e22-5c34ce6fca93
Taxonomy Organoheterocyclic compounds > Pyrrolidines
IUPAC Name 2-(hydroxymethyl)-5-(1-hydroxypentyl)pyrrolidine-3,4-diol
SMILES (Canonical) CCCCC(C1C(C(C(N1)CO)O)O)O
SMILES (Isomeric) CCCCC(C1C(C(C(N1)CO)O)O)O
InChI InChI=1S/C10H21NO4/c1-2-3-4-7(13)8-10(15)9(14)6(5-12)11-8/h6-15H,2-5H2,1H3
InChI Key HCIVEICIOHMIDJ-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

Top
Molecular Formula C10H21NO4
Molecular Weight 219.28 g/mol
Exact Mass 219.14705815 g/mol
Topological Polar Surface Area (TPSA) 93.00 Ų
XlogP 0.10
Atomic LogP (AlogP) -1.41
H-Bond Acceptor 5
H-Bond Donor 5
Rotatable Bonds 5

Synonyms

Top
There are no found synonyms.

2D Structure

Top
2D Structure of 2-(Hydroxymethyl)-5-(1-hydroxypentyl)pyrrolidine-3,4-diol

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8834 88.34%
Caco-2 - 0.8235 82.35%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.5857 58.57%
Subcellular localzation Lysosomes 0.4821 48.21%
OATP2B1 inhibitior - 0.8489 84.89%
OATP1B1 inhibitior + 0.9460 94.60%
OATP1B3 inhibitior + 0.9374 93.74%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9650 96.50%
P-glycoprotein inhibitior - 0.9706 97.06%
P-glycoprotein substrate - 0.6286 62.86%
CYP3A4 substrate - 0.5684 56.84%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.4466 44.66%
CYP3A4 inhibition - 0.9723 97.23%
CYP2C9 inhibition - 0.8936 89.36%
CYP2C19 inhibition - 0.9277 92.77%
CYP2D6 inhibition - 0.8729 87.29%
CYP1A2 inhibition - 0.8296 82.96%
CYP2C8 inhibition - 0.9257 92.57%
CYP inhibitory promiscuity - 0.9484 94.84%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.7264 72.64%
Eye corrosion - 0.9794 97.94%
Eye irritation - 0.9933 99.33%
Skin irritation - 0.7545 75.45%
Skin corrosion - 0.8680 86.80%
Ames mutagenesis - 0.8000 80.00%
Human Ether-a-go-go-Related Gene inhibition - 0.5061 50.61%
Micronuclear - 0.5600 56.00%
Hepatotoxicity - 0.6262 62.62%
skin sensitisation - 0.8686 86.86%
Respiratory toxicity - 0.6778 67.78%
Reproductive toxicity + 0.6444 64.44%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity + 0.5652 56.52%
Acute Oral Toxicity (c) III 0.6343 63.43%
Estrogen receptor binding - 0.7584 75.84%
Androgen receptor binding - 0.7143 71.43%
Thyroid receptor binding - 0.6246 62.46%
Glucocorticoid receptor binding - 0.5800 58.00%
Aromatase binding - 0.7749 77.49%
PPAR gamma - 0.7764 77.64%
Honey bee toxicity - 0.9707 97.07%
Biodegradation + 0.7000 70.00%
Crustacea aquatic toxicity - 0.7464 74.64%
Fish aquatic toxicity - 0.9579 95.79%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 96.94% 96.09%
CHEMBL2581 P07339 Cathepsin D 96.69% 98.95%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 93.26% 97.29%
CHEMBL253 P34972 Cannabinoid CB2 receptor 92.53% 97.25%
CHEMBL256 P0DMS8 Adenosine A3 receptor 90.08% 95.93%
CHEMBL2996 Q05655 Protein kinase C delta 89.64% 97.79%
CHEMBL5043 Q6P179 Endoplasmic reticulum aminopeptidase 2 89.25% 91.81%
CHEMBL1907589 P17787 Neuronal acetylcholine receptor; alpha4/beta2 88.65% 94.55%
CHEMBL3137262 O60341 LSD1/CoREST complex 87.26% 97.09%
CHEMBL1907 P15144 Aminopeptidase N 86.55% 93.31%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.95% 99.17%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 85.27% 92.88%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 84.82% 92.86%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.05% 100.00%
CHEMBL3130 O00329 PI3-kinase p110-delta subunit 82.17% 96.47%
CHEMBL2885 P07451 Carbonic anhydrase III 81.92% 87.45%
CHEMBL4105838 Q96GG9 DCN1-like protein 1 81.51% 95.00%
CHEMBL1907594 P30926 Neuronal acetylcholine receptor; alpha3/beta4 80.40% 97.23%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 80.31% 94.45%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 80.22% 95.89%
CHEMBL4793 Q86TI2 Dipeptidyl peptidase IX 80.19% 96.95%
CHEMBL255 P29275 Adenosine A2b receptor 80.00% 98.59%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Adenophora triphylla

Cross-Links

Top
PubChem 85144910
LOTUS LTS0200514
wikiData Q105025712