2-Cyclopentene-1-carbonitrile, (1R-cis)-

Details

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Internal ID 5a03a92a-1111-43db-bc9f-81fb01c06ca3
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Cyanogenic glycosides
IUPAC Name (1R,4S)-4-hydroxy-1-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxycyclopent-2-ene-1-carbonitrile
SMILES (Canonical) C1C(C=CC1(C#N)OC2C(C(C(C(O2)CO)O)O)O)O
SMILES (Isomeric) C1[C@@H](C=C[C@]1(C#N)OC2C(C(C(C(O2)CO)O)O)O)O
InChI InChI=1S/C12H17NO7/c13-5-12(2-1-6(15)3-12)20-11-10(18)9(17)8(16)7(4-14)19-11/h1-2,6-11,14-18H,3-4H2/t6-,7?,8?,9?,10?,11?,12+/m1/s1
InChI Key JRCWYCAEAZEYNW-WUSXWCFBSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C12H17NO7
Molecular Weight 287.27 g/mol
Exact Mass 287.10050188 g/mol
Topological Polar Surface Area (TPSA) 143.00 Ų
XlogP -2.30
Atomic LogP (AlogP) -2.61
H-Bond Acceptor 8
H-Bond Donor 5
Rotatable Bonds 3

Synonyms

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NSC621684
NSC-621684
2-Cyclopentene-1-carbonitrile, (1R-cis)-

2D Structure

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2D Structure of 2-Cyclopentene-1-carbonitrile, (1R-cis)-

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.8677 86.77%
Caco-2 - 0.8764 87.64%
Blood Brain Barrier + 0.6000 60.00%
Human oral bioavailability - 0.6429 64.29%
Subcellular localzation Mitochondria 0.6033 60.33%
OATP2B1 inhibitior - 0.8602 86.02%
OATP1B1 inhibitior + 0.9283 92.83%
OATP1B3 inhibitior + 0.9537 95.37%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.8750 87.50%
BSEP inhibitior - 0.9495 94.95%
P-glycoprotein inhibitior - 0.9200 92.00%
P-glycoprotein substrate - 0.9492 94.92%
CYP3A4 substrate + 0.5393 53.93%
CYP2C9 substrate - 0.8074 80.74%
CYP2D6 substrate - 0.8197 81.97%
CYP3A4 inhibition - 0.8915 89.15%
CYP2C9 inhibition - 0.9123 91.23%
CYP2C19 inhibition - 0.8679 86.79%
CYP2D6 inhibition - 0.9263 92.63%
CYP1A2 inhibition - 0.8973 89.73%
CYP2C8 inhibition - 0.8115 81.15%
CYP inhibitory promiscuity - 0.8562 85.62%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6849 68.49%
Eye corrosion - 0.9885 98.85%
Eye irritation - 0.9865 98.65%
Skin irritation - 0.8140 81.40%
Skin corrosion - 0.9361 93.61%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3993 39.93%
Micronuclear - 0.7600 76.00%
Hepatotoxicity - 0.7199 71.99%
skin sensitisation - 0.8570 85.70%
Respiratory toxicity - 0.5556 55.56%
Reproductive toxicity + 0.5778 57.78%
Mitochondrial toxicity - 0.6125 61.25%
Nephrotoxicity - 0.8479 84.79%
Acute Oral Toxicity (c) III 0.5785 57.85%
Estrogen receptor binding - 0.8246 82.46%
Androgen receptor binding - 0.5844 58.44%
Thyroid receptor binding - 0.5164 51.64%
Glucocorticoid receptor binding - 0.5291 52.91%
Aromatase binding - 0.5824 58.24%
PPAR gamma - 0.5354 53.54%
Honey bee toxicity - 0.6061 60.61%
Biodegradation - 0.6750 67.50%
Crustacea aquatic toxicity - 0.6700 67.00%
Fish aquatic toxicity - 0.9280 92.80%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.65% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.84% 96.09%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 93.71% 95.83%
CHEMBL226 P30542 Adenosine A1 receptor 92.84% 95.93%
CHEMBL218 P21554 Cannabinoid CB1 receptor 91.63% 96.61%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.58% 97.09%
CHEMBL221 P23219 Cyclooxygenase-1 91.02% 90.17%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 87.81% 86.92%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.53% 95.89%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 82.01% 100.00%
CHEMBL2243 O00519 Anandamide amidohydrolase 80.46% 97.53%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Kiggelaria africana
Passiflora suberosa

Cross-Links

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PubChem 11969762
LOTUS LTS0051465
wikiData Q105133840