19,20-Dihydrotabernamine

Details

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Internal ID 7ecaa68d-8d42-43da-965f-25297a289b5d
Taxonomy Alkaloids and derivatives > Ibogan-type alkaloids
IUPAC Name methyl (1R,12S,14R,15S)-15-ethyl-12-[(1R,15R,17S,18S)-17-ethyl-3,13-diazapentacyclo[13.3.1.02,10.04,9.013,18]nonadeca-2(10),4(9),5,7-tetraen-6-yl]-17-methyl-10,17-diazatetracyclo[12.3.1.03,11.04,9]octadeca-3(11),4,6,8-tetraene-18-carboxylate
SMILES (Canonical) CCC1CC2CC3C1N(C2)CCC4=C3NC5=C4C=CC(=C5)C6CC7C(CN(C(C7C(=O)OC)CC8=C6NC9=CC=CC=C89)C)CC
SMILES (Isomeric) CC[C@H]1C[C@@H]2C[C@@H]3[C@H]1N(C2)CCC4=C3NC5=C4C=CC(=C5)[C@@H]6C[C@@H]7[C@@H](CN([C@@H](C7C(=O)OC)CC8=C6NC9=CC=CC=C89)C)CC
InChI InChI=1S/C40H50N4O2/c1-5-23-15-22-16-32-37-28(13-14-44(20-22)39(23)32)27-12-11-25(17-34(27)42-37)30-18-29-24(6-2)21-43(3)35(36(29)40(45)46-4)19-31-26-9-7-8-10-33(26)41-38(30)31/h7-12,17,22-24,29-30,32,35-36,39,41-42H,5-6,13-16,18-21H2,1-4H3/t22-,23+,24-,29-,30+,32+,35-,36?,39+/m1/s1
InChI Key VFOGOXRSGPCZGG-QPFJEDRLSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C40H50N4O2
Molecular Weight 618.80 g/mol
Exact Mass 618.39337685 g/mol
Topological Polar Surface Area (TPSA) 64.40 Ų
XlogP 7.40
Atomic LogP (AlogP) 7.23
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 4

Synonyms

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19,20-dihydrotabernamine
BDBM50380807

2D Structure

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2D Structure of 19,20-Dihydrotabernamine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9806 98.06%
Caco-2 - 0.7631 76.31%
Blood Brain Barrier + 0.7750 77.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.7039 70.39%
OATP2B1 inhibitior - 0.7094 70.94%
OATP1B1 inhibitior + 0.8284 82.84%
OATP1B3 inhibitior + 0.9344 93.44%
MATE1 inhibitior - 0.5637 56.37%
OCT2 inhibitior - 0.5750 57.50%
BSEP inhibitior + 0.9825 98.25%
P-glycoprotein inhibitior + 0.8826 88.26%
P-glycoprotein substrate + 0.8521 85.21%
CYP3A4 substrate + 0.7482 74.82%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.3928 39.28%
CYP3A4 inhibition + 0.5059 50.59%
CYP2C9 inhibition - 0.6870 68.70%
CYP2C19 inhibition - 0.7941 79.41%
CYP2D6 inhibition - 0.5567 55.67%
CYP1A2 inhibition - 0.6222 62.22%
CYP2C8 inhibition + 0.6959 69.59%
CYP inhibitory promiscuity - 0.5713 57.13%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.7040 70.40%
Eye corrosion - 0.9913 99.13%
Eye irritation - 0.9408 94.08%
Skin irritation - 0.7996 79.96%
Skin corrosion - 0.9407 94.07%
Ames mutagenesis - 0.6400 64.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8808 88.08%
Micronuclear + 0.5700 57.00%
Hepatotoxicity - 0.5781 57.81%
skin sensitisation - 0.8921 89.21%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.9667 96.67%
Mitochondrial toxicity + 0.9625 96.25%
Nephrotoxicity - 0.8133 81.33%
Acute Oral Toxicity (c) II 0.4676 46.76%
Estrogen receptor binding + 0.7759 77.59%
Androgen receptor binding + 0.7991 79.91%
Thyroid receptor binding + 0.5544 55.44%
Glucocorticoid receptor binding + 0.6909 69.09%
Aromatase binding + 0.6009 60.09%
PPAR gamma + 0.6377 63.77%
Honey bee toxicity - 0.7154 71.54%
Biodegradation - 0.9250 92.50%
Crustacea aquatic toxicity - 0.5200 52.00%
Fish aquatic toxicity + 0.9755 97.55%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.55% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.71% 91.11%
CHEMBL2581 P07339 Cathepsin D 98.30% 98.95%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 96.99% 85.14%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 96.85% 94.45%
CHEMBL255 P29275 Adenosine A2b receptor 95.56% 98.59%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 94.82% 95.56%
CHEMBL1914 P06276 Butyrylcholinesterase 94.24% 95.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.10% 97.09%
CHEMBL228 P31645 Serotonin transporter 90.79% 95.51%
CHEMBL238 Q01959 Dopamine transporter 90.30% 95.88%
CHEMBL240 Q12809 HERG 89.84% 89.76%
CHEMBL2535 P11166 Glucose transporter 88.07% 98.75%
CHEMBL4208 P20618 Proteasome component C5 87.05% 90.00%
CHEMBL217 P14416 Dopamine D2 receptor 85.57% 95.62%
CHEMBL2095226 P05556 Integrin alpha-5/beta-1 83.26% 96.39%
CHEMBL3060 Q9Y345 Glycine transporter 2 82.92% 99.17%
CHEMBL4040 P28482 MAP kinase ERK2 82.76% 83.82%
CHEMBL1806 P11388 DNA topoisomerase II alpha 82.46% 89.00%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 82.11% 97.50%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 81.37% 92.62%
CHEMBL1907600 Q00535 Cyclin-dependent kinase 5/CDK5 activator 1 80.87% 93.03%
CHEMBL2095172 P14867 GABA-A receptor; alpha-1/beta-2/gamma-2 80.63% 92.67%
CHEMBL5028 O14672 ADAM10 80.60% 97.50%
CHEMBL4895 P30530 Tyrosine-protein kinase receptor UFO 80.28% 90.95%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Tabernaemontana divaricata

Cross-Links

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PubChem 44418787
LOTUS LTS0255459
wikiData Q105285475