3-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-2-(4-methoxyphenyl)-8-(3-methylbut-2-enyl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one

Details

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Internal ID a1d919ae-88e1-4ae0-a39c-4a466350e15d
Taxonomy Phenylpropanoids and polyketides > Flavonoids > Flavonoid glycosides > Flavonoid O-glycosides > Flavonoid-7-O-glycosides
IUPAC Name 3-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-2-(4-methoxyphenyl)-8-(3-methylbut-2-enyl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one
SMILES (Canonical) CC1C(C(C(C(O1)OC2C(C(C(OC2OC3=C(OC4=C(C3=O)C=CC(=C4CC=C(C)C)OC5C(C(C(C(O5)CO)O)O)O)C6=CC=C(C=C6)OC)CO)O)O)O)O)O
SMILES (Isomeric) C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]2[C@H]([C@@H]([C@H](O[C@H]2OC3=C(OC4=C(C3=O)C=CC(=C4CC=C(C)C)O[C@H]5[C@@H]([C@H]([C@@H]([C@H](O5)CO)O)O)O)C6=CC=C(C=C6)OC)CO)O)O)O)O)O
InChI InChI=1S/C39H50O19/c1-15(2)5-10-19-21(53-38-32(50)29(47)26(44)22(13-40)54-38)12-11-20-25(43)35(33(56-34(19)20)17-6-8-18(51-4)9-7-17)57-39-36(30(48)27(45)23(14-41)55-39)58-37-31(49)28(46)24(42)16(3)52-37/h5-9,11-12,16,22-24,26-32,36-42,44-50H,10,13-14H2,1-4H3/t16-,22+,23+,24-,26+,27+,28+,29-,30-,31+,32+,36+,37-,38+,39-/m0/s1
InChI Key NSNVPRPWHAWADT-FAWIOFLOSA-N
Popularity 7 references in papers

Physical and Chemical Properties

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Molecular Formula C39H50O19
Molecular Weight 822.80 g/mol
Exact Mass 822.29462936 g/mol
Topological Polar Surface Area (TPSA) 293.00 Ų
XlogP -0.10
Atomic LogP (AlogP) -1.81
H-Bond Acceptor 19
H-Bond Donor 10
Rotatable Bonds 12

Synonyms

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Q-100060

2D Structure

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2D Structure of 3-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-2-(4-methoxyphenyl)-8-(3-methylbut-2-enyl)-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.8164 81.64%
Caco-2 - 0.9372 93.72%
Blood Brain Barrier - 0.6500 65.00%
Human oral bioavailability - 0.7286 72.86%
Subcellular localzation Mitochondria 0.6461 64.61%
OATP2B1 inhibitior - 0.5846 58.46%
OATP1B1 inhibitior + 0.8923 89.23%
OATP1B3 inhibitior + 0.9556 95.56%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.9000 90.00%
BSEP inhibitior + 0.9624 96.24%
P-glycoprotein inhibitior + 0.6802 68.02%
P-glycoprotein substrate + 0.5585 55.85%
CYP3A4 substrate + 0.6781 67.81%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8258 82.58%
CYP3A4 inhibition - 0.9605 96.05%
CYP2C9 inhibition - 0.7520 75.20%
CYP2C19 inhibition - 0.6564 65.64%
CYP2D6 inhibition - 0.8523 85.23%
CYP1A2 inhibition - 0.7720 77.20%
CYP2C8 inhibition + 0.6580 65.80%
CYP inhibitory promiscuity - 0.5971 59.71%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.7249 72.49%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9119 91.19%
Skin irritation - 0.8116 81.16%
Skin corrosion - 0.9490 94.90%
Ames mutagenesis - 0.5254 52.54%
Human Ether-a-go-go-Related Gene inhibition + 0.8611 86.11%
Micronuclear - 0.5167 51.67%
Hepatotoxicity - 0.6125 61.25%
skin sensitisation - 0.8660 86.60%
Respiratory toxicity + 0.6222 62.22%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.7668 76.68%
Acute Oral Toxicity (c) III 0.6499 64.99%
Estrogen receptor binding + 0.8123 81.23%
Androgen receptor binding + 0.6742 67.42%
Thyroid receptor binding + 0.5448 54.48%
Glucocorticoid receptor binding + 0.6248 62.48%
Aromatase binding + 0.5608 56.08%
PPAR gamma + 0.7166 71.66%
Honey bee toxicity - 0.6940 69.40%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.6800 68.00%
Fish aquatic toxicity + 0.9594 95.94%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.34% 91.11%
CHEMBL1951 P21397 Monoamine oxidase A 97.88% 91.49%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 95.95% 94.00%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.08% 89.00%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 92.73% 83.57%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 92.13% 85.14%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 92.12% 96.00%
CHEMBL2581 P07339 Cathepsin D 92.11% 98.95%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 91.86% 95.56%
CHEMBL3714130 P46095 G-protein coupled receptor 6 91.85% 97.36%
CHEMBL1293249 Q13887 Kruppel-like factor 5 91.12% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 90.34% 99.17%
CHEMBL3401 O75469 Pregnane X receptor 90.19% 94.73%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 89.54% 86.92%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.22% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.86% 95.89%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Epimedium diphyllum
Epimedium grandiflorum
Epimedium sagittatum
Vancouveria hexandra

Cross-Links

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PubChem 11972345
LOTUS LTS0092001
wikiData Q105185160