(2S,3R,4S,5S,6R)-2-[5-[(3R,3aS,6S,6aR)-3-(1,3-benzodioxol-5-yl)-3a,6a-dihydroxy-1,3,4,6-tetrahydrofuro[3,4-c]furan-6-yl]-2-hydroxyphenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

Details

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Internal ID 81cea6ad-b5c6-4db0-8f44-b1ae279ff0b7
Taxonomy Lignans, neolignans and related compounds > Lignan glycosides
IUPAC Name (2S,3R,4S,5S,6R)-2-[5-[(3R,3aS,6S,6aR)-3-(1,3-benzodioxol-5-yl)-3a,6a-dihydroxy-1,3,4,6-tetrahydrofuro[3,4-c]furan-6-yl]-2-hydroxyphenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol
SMILES (Canonical) C1C2(C(OCC2(C(O1)C3=CC(=C(C=C3)O)OC4C(C(C(C(O4)CO)O)O)O)O)C5=CC6=C(C=C5)OCO6)O
SMILES (Isomeric) C1[C@@]2([C@H](OC[C@]2([C@@H](O1)C3=CC(=C(C=C3)O)O[C@H]4[C@@H]([C@H]([C@@H]([C@H](O4)CO)O)O)O)O)C5=CC6=C(C=C5)OCO6)O
InChI InChI=1S/C25H28O13/c26-7-17-18(28)19(29)20(30)23(38-17)37-15-5-11(1-3-13(15)27)21-24(31)8-34-22(25(24,32)9-33-21)12-2-4-14-16(6-12)36-10-35-14/h1-6,17-23,26-32H,7-10H2/t17-,18-,19+,20-,21+,22-,23-,24-,25+/m1/s1
InChI Key HUVQMIPFAVBQIA-UEJHDFEVSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C25H28O13
Molecular Weight 536.50 g/mol
Exact Mass 536.15299094 g/mol
Topological Polar Surface Area (TPSA) 197.00 Ų
XlogP -1.80
Atomic LogP (AlogP) -1.40
H-Bond Acceptor 13
H-Bond Donor 7
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4S,5S,6R)-2-[5-[(3R,3aS,6S,6aR)-3-(1,3-benzodioxol-5-yl)-3a,6a-dihydroxy-1,3,4,6-tetrahydrofuro[3,4-c]furan-6-yl]-2-hydroxyphenoxy]-6-(hydroxymethyl)oxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6144 61.44%
Caco-2 - 0.8929 89.29%
Blood Brain Barrier - 0.5000 50.00%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.6334 63.34%
OATP2B1 inhibitior - 0.8550 85.50%
OATP1B1 inhibitior + 0.9214 92.14%
OATP1B3 inhibitior + 0.9500 95.00%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.7750 77.50%
BSEP inhibitior - 0.6702 67.02%
P-glycoprotein inhibitior - 0.4797 47.97%
P-glycoprotein substrate - 0.8609 86.09%
CYP3A4 substrate + 0.5720 57.20%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8139 81.39%
CYP3A4 inhibition - 0.6844 68.44%
CYP2C9 inhibition - 0.9043 90.43%
CYP2C19 inhibition - 0.7530 75.30%
CYP2D6 inhibition - 0.8203 82.03%
CYP1A2 inhibition - 0.8903 89.03%
CYP2C8 inhibition - 0.6592 65.92%
CYP inhibitory promiscuity - 0.7646 76.46%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.5306 53.06%
Eye corrosion - 0.9915 99.15%
Eye irritation - 0.8786 87.86%
Skin irritation - 0.7938 79.38%
Skin corrosion - 0.9491 94.91%
Ames mutagenesis - 0.5600 56.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7524 75.24%
Micronuclear + 0.5700 57.00%
Hepatotoxicity - 0.8375 83.75%
skin sensitisation - 0.8797 87.97%
Respiratory toxicity + 0.5444 54.44%
Reproductive toxicity + 0.8556 85.56%
Mitochondrial toxicity - 0.5125 51.25%
Nephrotoxicity - 0.5837 58.37%
Acute Oral Toxicity (c) III 0.5251 52.51%
Estrogen receptor binding + 0.7763 77.63%
Androgen receptor binding + 0.6934 69.34%
Thyroid receptor binding - 0.5000 50.00%
Glucocorticoid receptor binding - 0.5491 54.91%
Aromatase binding + 0.5925 59.25%
PPAR gamma + 0.7074 70.74%
Honey bee toxicity - 0.7667 76.67%
Biodegradation - 0.7500 75.00%
Crustacea aquatic toxicity - 0.6900 69.00%
Fish aquatic toxicity + 0.9009 90.09%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.86% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 96.76% 97.09%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.83% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 93.68% 95.93%
CHEMBL5697 Q9GZT9 Egl nine homolog 1 93.38% 93.40%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 93.31% 94.45%
CHEMBL2581 P07339 Cathepsin D 90.73% 98.95%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.57% 89.00%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 88.02% 92.62%
CHEMBL4208 P20618 Proteasome component C5 86.65% 90.00%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 86.33% 99.15%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.07% 94.00%
CHEMBL225 P28335 Serotonin 2c (5-HT2c) receptor 85.73% 89.62%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.73% 100.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.09% 95.56%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 84.07% 96.77%
CHEMBL218 P21554 Cannabinoid CB1 receptor 83.95% 96.61%
CHEMBL5608 Q16288 NT-3 growth factor receptor 82.68% 95.89%
CHEMBL2563 Q9UQL6 Histone deacetylase 5 82.33% 89.67%
CHEMBL1075094 Q16236 Nuclear factor erythroid 2-related factor 2 81.38% 96.00%
CHEMBL3714130 P46095 G-protein coupled receptor 6 80.81% 97.36%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Vitex glabrata

Cross-Links

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PubChem 162943552
LOTUS LTS0239130
wikiData Q105034076