1,4,5-Trihydroxy-3-prenylxanthone

Details

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Internal ID 8c31386f-268d-4a13-9486-8e59ba6e2701
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 1,4,5-trihydroxy-3-(3-methylbut-2-enyl)xanthen-9-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C18H16O5/c1-9(2)6-7-10-8-13(20)14-16(22)11-4-3-5-12(19)17(11)23-18(14)15(10)21/h3-6,8,19-21H,7H2,1-2H3
InChI Key BRVVGOBMRRGKCK-UHFFFAOYSA-N
Popularity 5 references in papers

Physical and Chemical Properties

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Molecular Formula C18H16O5
Molecular Weight 312.30 g/mol
Exact Mass 312.09977361 g/mol
Topological Polar Surface Area (TPSA) 87.00 Ų
XlogP 4.40
Atomic LogP (AlogP) 3.57
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 2

Synonyms

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CHEMBL188061
CHEBI:174994
DTXSID401187821
1,4,5-trihydroxy-3-(3-methylbut-2-en-1-yl)-9H-xanthen-9-one
BDBM50155430
136364-72-2
1,4,5-trihydroxy-3-(3-methylbut-2-enyl)xanthen-9-one
1,4,5-Trihydroxy-3-(3-methyl-but-2-enyl)-xanthen-9-one
1,4,5-trihydroxy-3-(3-methylbut-2-enyl)-9 h-xanthen-9-one
1,4,5-trihydroxy-3-(3-methylbut-2-enyl)-9h-xanthen-9-one
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of 1,4,5-Trihydroxy-3-prenylxanthone

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9840 98.40%
Caco-2 - 0.6647 66.47%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability + 0.5429 54.29%
Subcellular localzation Mitochondria 0.7099 70.99%
OATP2B1 inhibitior - 0.5533 55.33%
OATP1B1 inhibitior + 0.9236 92.36%
OATP1B3 inhibitior + 0.9772 97.72%
MATE1 inhibitior - 0.7400 74.00%
OCT2 inhibitior - 0.9250 92.50%
BSEP inhibitior - 0.4786 47.86%
P-glycoprotein inhibitior - 0.6533 65.33%
P-glycoprotein substrate - 0.7226 72.26%
CYP3A4 substrate + 0.5456 54.56%
CYP2C9 substrate - 0.5755 57.55%
CYP2D6 substrate - 0.8328 83.28%
CYP3A4 inhibition - 0.7690 76.90%
CYP2C9 inhibition + 0.9521 95.21%
CYP2C19 inhibition + 0.9039 90.39%
CYP2D6 inhibition + 0.6349 63.49%
CYP1A2 inhibition + 0.9086 90.86%
CYP2C8 inhibition - 0.6638 66.38%
CYP inhibitory promiscuity + 0.8815 88.15%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.7006 70.06%
Eye corrosion - 0.9906 99.06%
Eye irritation + 0.8041 80.41%
Skin irritation - 0.6790 67.90%
Skin corrosion - 0.9170 91.70%
Ames mutagenesis + 0.6700 67.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6387 63.87%
Micronuclear + 0.5200 52.00%
Hepatotoxicity + 0.6125 61.25%
skin sensitisation - 0.6866 68.66%
Respiratory toxicity + 0.7556 75.56%
Reproductive toxicity + 0.8778 87.78%
Mitochondrial toxicity + 0.8000 80.00%
Nephrotoxicity - 0.8311 83.11%
Acute Oral Toxicity (c) III 0.5531 55.31%
Estrogen receptor binding + 0.7711 77.11%
Androgen receptor binding + 0.6889 68.89%
Thyroid receptor binding - 0.5297 52.97%
Glucocorticoid receptor binding + 0.9456 94.56%
Aromatase binding + 0.7325 73.25%
PPAR gamma + 0.9433 94.33%
Honey bee toxicity - 0.8985 89.85%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.5600 56.00%
Fish aquatic toxicity + 0.9929 99.29%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1951 P21397 Monoamine oxidase A 40000 nM
IC50
PMID: 23398362

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.36% 91.11%
CHEMBL2581 P07339 Cathepsin D 97.39% 98.95%
CHEMBL3401 O75469 Pregnane X receptor 96.51% 94.73%
CHEMBL1951 P21397 Monoamine oxidase A 95.66% 91.49%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.32% 95.56%
CHEMBL3192 Q9BY41 Histone deacetylase 8 95.04% 93.99%
CHEMBL1806 P11388 DNA topoisomerase II alpha 93.39% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 90.60% 94.45%
CHEMBL1937 Q92769 Histone deacetylase 2 90.14% 94.75%
CHEMBL1293249 Q13887 Kruppel-like factor 5 89.05% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 86.21% 94.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 84.42% 99.23%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 84.33% 85.14%
CHEMBL3830 Q2M2I8 Adaptor-associated kinase 83.54% 83.10%
CHEMBL3060 Q9Y345 Glycine transporter 2 80.44% 99.17%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.24% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Garcinia livingstonei

Cross-Links

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PubChem 15127377
NPASS NPC75069
ChEMBL CHEMBL188061
LOTUS LTS0064892
wikiData Q104945042