(5R,7R,8S,9R,10R,13S,17S)-17-[(2R,3S,5R)-5-[(2S)-3,3-dimethyloxiran-2-yl]-2-methoxyoxolan-3-yl]-7-hydroxy-4,4,8,10,13-pentamethyl-5,6,7,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-3-one

Details

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Internal ID b7c19368-5125-48ee-a7d7-a499a9a61ca4
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Triterpenoids > Limonoids
IUPAC Name (5R,7R,8S,9R,10R,13S,17S)-17-[(2R,3S,5R)-5-[(2S)-3,3-dimethyloxiran-2-yl]-2-methoxyoxolan-3-yl]-7-hydroxy-4,4,8,10,13-pentamethyl-5,6,7,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-3-one
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C31H48O5/c1-27(2)22-16-24(33)31(7)20-10-9-18(17-15-19(35-26(17)34-8)25-28(3,4)36-25)29(20,5)13-11-21(31)30(22,6)14-12-23(27)32/h12,14,17-22,24-26,33H,9-11,13,15-16H2,1-8H3/t17-,18-,19+,20?,21+,22-,24+,25-,26+,29-,30+,31-/m0/s1
InChI Key PPZXDUFPMKSAJC-PJFQGQSISA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C31H48O5
Molecular Weight 500.70 g/mol
Exact Mass 500.35017463 g/mol
Topological Polar Surface Area (TPSA) 68.30 Ų
XlogP 6.00
Atomic LogP (AlogP) 5.54
H-Bond Acceptor 5
H-Bond Donor 1
Rotatable Bonds 3

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (5R,7R,8S,9R,10R,13S,17S)-17-[(2R,3S,5R)-5-[(2S)-3,3-dimethyloxiran-2-yl]-2-methoxyoxolan-3-yl]-7-hydroxy-4,4,8,10,13-pentamethyl-5,6,7,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-3-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9826 98.26%
Caco-2 - 0.6844 68.44%
Blood Brain Barrier + 0.7250 72.50%
Human oral bioavailability - 0.6714 67.14%
Subcellular localzation Mitochondria 0.7120 71.20%
OATP2B1 inhibitior - 0.8619 86.19%
OATP1B1 inhibitior + 0.8247 82.47%
OATP1B3 inhibitior + 0.8295 82.95%
MATE1 inhibitior - 1.0000 100.00%
OCT2 inhibitior - 0.7000 70.00%
BSEP inhibitior + 0.8403 84.03%
P-glycoprotein inhibitior + 0.6452 64.52%
P-glycoprotein substrate - 0.6283 62.83%
CYP3A4 substrate + 0.7543 75.43%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8731 87.31%
CYP3A4 inhibition + 0.6002 60.02%
CYP2C9 inhibition - 0.7593 75.93%
CYP2C19 inhibition - 0.7581 75.81%
CYP2D6 inhibition - 0.9391 93.91%
CYP1A2 inhibition - 0.8134 81.34%
CYP2C8 inhibition + 0.5208 52.08%
CYP inhibitory promiscuity - 0.9070 90.70%
UGT catelyzed + 0.9000 90.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.4379 43.79%
Eye corrosion - 0.9887 98.87%
Eye irritation - 0.9513 95.13%
Skin irritation - 0.5826 58.26%
Skin corrosion - 0.9167 91.67%
Ames mutagenesis - 0.6964 69.64%
Human Ether-a-go-go-Related Gene inhibition - 0.4419 44.19%
Micronuclear - 0.6400 64.00%
Hepatotoxicity - 0.8125 81.25%
skin sensitisation - 0.8331 83.31%
Respiratory toxicity + 0.9000 90.00%
Reproductive toxicity + 0.7778 77.78%
Mitochondrial toxicity + 0.8000 80.00%
Nephrotoxicity - 0.8080 80.80%
Acute Oral Toxicity (c) I 0.5002 50.02%
Estrogen receptor binding + 0.7347 73.47%
Androgen receptor binding + 0.6931 69.31%
Thyroid receptor binding + 0.6352 63.52%
Glucocorticoid receptor binding + 0.7237 72.37%
Aromatase binding + 0.7326 73.26%
PPAR gamma + 0.6876 68.76%
Honey bee toxicity - 0.7201 72.01%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity + 0.6200 62.00%
Fish aquatic toxicity + 0.9737 97.37%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.90% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 91.68% 96.09%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.09% 100.00%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.02% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 90.61% 95.56%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 88.47% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.68% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.29% 95.89%
CHEMBL1871 P10275 Androgen Receptor 86.23% 96.43%
CHEMBL204 P00734 Thrombin 86.09% 96.01%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.89% 94.45%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 83.05% 93.04%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 82.96% 85.14%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 82.77% 92.62%
CHEMBL226 P30542 Adenosine A1 receptor 80.52% 95.93%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Turraea pubescens

Cross-Links

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PubChem 73353442
LOTUS LTS0162621
wikiData Q105213118