1,3,5-Trihydroxy-4-[(2E)-3,7-dimethyl-2,6-octadienyl]-9H-xanthen-9-one

Details

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Internal ID f6296b35-9e5a-494b-bb1a-1135cf996772
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones > 4-prenylated xanthones
IUPAC Name 4-[(2E)-3,7-dimethylocta-2,6-dienyl]-1,3,5-trihydroxyxanthen-9-one
SMILES (Canonical) CC(=CCCC(=CCC1=C2C(=C(C=C1O)O)C(=O)C3=C(O2)C(=CC=C3)O)C)C
SMILES (Isomeric) CC(=CCC/C(=C/CC1=C2C(=C(C=C1O)O)C(=O)C3=C(O2)C(=CC=C3)O)/C)C
InChI InChI=1S/C23H24O5/c1-13(2)6-4-7-14(3)10-11-15-18(25)12-19(26)20-21(27)16-8-5-9-17(24)22(16)28-23(15)20/h5-6,8-10,12,24-26H,4,7,11H2,1-3H3/b14-10+
InChI Key PCKHKINJZFNYEO-GXDHUFHOSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C23H24O5
Molecular Weight 380.40 g/mol
Exact Mass 380.16237386 g/mol
Topological Polar Surface Area (TPSA) 87.00 Ų
XlogP 6.20
Atomic LogP (AlogP) 5.30
H-Bond Acceptor 5
H-Bond Donor 3
Rotatable Bonds 5

Synonyms

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4-[(2E)-3,7-Dimethyl-2,6-octadien-1-yl]-1,3,5-trihydroxy-9H-xanthen-9-one
4-((2E)-3,7-Dimethyl-2,6-octadien-1-yl)-1,3,5-trihydroxy-9H-xanthen-9-one
RefChem:286343
CHEMBL482023
DTXSID601148152

2D Structure

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2D Structure of 1,3,5-Trihydroxy-4-[(2E)-3,7-dimethyl-2,6-octadienyl]-9H-xanthen-9-one

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9776 97.76%
Caco-2 - 0.6791 67.91%
Blood Brain Barrier - 0.5250 52.50%
Human oral bioavailability + 0.5571 55.71%
Subcellular localzation Mitochondria 0.6480 64.80%
OATP2B1 inhibitior + 0.5729 57.29%
OATP1B1 inhibitior + 0.9042 90.42%
OATP1B3 inhibitior + 0.8983 89.83%
MATE1 inhibitior - 0.7400 74.00%
OCT2 inhibitior - 0.7564 75.64%
BSEP inhibitior + 0.8458 84.58%
P-glycoprotein inhibitior + 0.5863 58.63%
P-glycoprotein substrate - 0.7081 70.81%
CYP3A4 substrate + 0.5817 58.17%
CYP2C9 substrate - 0.5755 57.55%
CYP2D6 substrate - 0.8328 83.28%
CYP3A4 inhibition - 0.5430 54.30%
CYP2C9 inhibition + 0.5655 56.55%
CYP2C19 inhibition + 0.6398 63.98%
CYP2D6 inhibition - 0.6968 69.68%
CYP1A2 inhibition + 0.8789 87.89%
CYP2C8 inhibition - 0.6274 62.74%
CYP inhibitory promiscuity + 0.6486 64.86%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.7694 76.94%
Eye corrosion - 0.9903 99.03%
Eye irritation - 0.5418 54.18%
Skin irritation - 0.7308 73.08%
Skin corrosion - 0.9257 92.57%
Ames mutagenesis + 0.6100 61.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7059 70.59%
Micronuclear - 0.8300 83.00%
Hepatotoxicity - 0.5875 58.75%
skin sensitisation - 0.7164 71.64%
Respiratory toxicity + 0.7889 78.89%
Reproductive toxicity + 0.8333 83.33%
Mitochondrial toxicity + 0.7250 72.50%
Nephrotoxicity - 0.8261 82.61%
Acute Oral Toxicity (c) III 0.5435 54.35%
Estrogen receptor binding + 0.8833 88.33%
Androgen receptor binding + 0.7079 70.79%
Thyroid receptor binding + 0.6423 64.23%
Glucocorticoid receptor binding + 0.8750 87.50%
Aromatase binding + 0.7552 75.52%
PPAR gamma + 0.9299 92.99%
Honey bee toxicity - 0.8459 84.59%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.5400 54.00%
Fish aquatic toxicity + 1.0000 100.00%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.79% 91.11%
CHEMBL3401 O75469 Pregnane X receptor 97.38% 94.73%
CHEMBL2581 P07339 Cathepsin D 97.26% 98.95%
CHEMBL1951 P21397 Monoamine oxidase A 96.61% 91.49%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 95.02% 95.56%
CHEMBL4769 O95749 Geranylgeranyl pyrophosphate synthetase 93.75% 92.08%
CHEMBL1806 P11388 DNA topoisomerase II alpha 92.83% 89.00%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.61% 94.45%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 88.70% 99.23%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.21% 86.33%
CHEMBL3060 Q9Y345 Glycine transporter 2 85.67% 99.17%
CHEMBL3192 Q9BY41 Histone deacetylase 8 84.39% 93.99%
CHEMBL1937 Q92769 Histone deacetylase 2 82.01% 94.75%
CHEMBL1293255 P15428 15-hydroxyprostaglandin dehydrogenase [NAD+] 81.21% 83.57%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.94% 94.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Dorstenia prorepens
Garcinia livingstonei
Montrouziera sphaeroidea

Cross-Links

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PubChem 15127379
NPASS NPC273462
ChEMBL CHEMBL482023
LOTUS LTS0223702
wikiData Q105205803