1,3-dihydroxy-5-methoxy-9H-xanthen-9-one

Details

Top
Internal ID 3ea80195-54d9-4551-bca7-afd397cd7382
Taxonomy Organoheterocyclic compounds > Benzopyrans > 1-benzopyrans > Xanthones
IUPAC Name 1,3-dihydroxy-5-methoxyxanthen-9-one
SMILES (Canonical) COC1=CC=CC2=C1OC3=CC(=CC(=C3C2=O)O)O
SMILES (Isomeric) COC1=CC=CC2=C1OC3=CC(=CC(=C3C2=O)O)O
InChI InChI=1S/C14H10O5/c1-18-10-4-2-3-8-13(17)12-9(16)5-7(15)6-11(12)19-14(8)10/h2-6,15-16H,1H3
InChI Key CCLPDGXDCPXOCN-UHFFFAOYSA-N
Popularity 10 references in papers

Physical and Chemical Properties

Top
Molecular Formula C14H10O5
Molecular Weight 258.23 g/mol
Exact Mass 258.05282342 g/mol
Topological Polar Surface Area (TPSA) 76.00 Ų
XlogP 2.80
Atomic LogP (AlogP) 2.37
H-Bond Acceptor 5
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

Top
6563-47-9
1,3-dihydroxy-5-methoxyxanthen-9-one
1,3-dihydroxy-5-methoxy-xanthen-9-one
SCHEMBL5348538
1,3-dihydroxy-5-methoxyxanthone
CCLPDGXDCPXOCN-UHFFFAOYSA-N
MFCD11108887
STL466254
AKOS004938965
NS-03959
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

Top
2D Structure of 1,3-dihydroxy-5-methoxy-9H-xanthen-9-one

3D Structure

Top

ADMET Properties (via admetSAR 2)

Top
Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9404 94.04%
Caco-2 + 0.5459 54.59%
Blood Brain Barrier - 0.8000 80.00%
Human oral bioavailability + 0.5286 52.86%
Subcellular localzation Mitochondria 0.5738 57.38%
OATP2B1 inhibitior - 0.7089 70.89%
OATP1B1 inhibitior + 0.9238 92.38%
OATP1B3 inhibitior + 0.9861 98.61%
MATE1 inhibitior + 0.5400 54.00%
OCT2 inhibitior - 0.9500 95.00%
BSEP inhibitior - 0.6315 63.15%
P-glycoprotein inhibitior - 0.6451 64.51%
P-glycoprotein substrate - 0.7726 77.26%
CYP3A4 substrate + 0.5906 59.06%
CYP2C9 substrate - 0.6401 64.01%
CYP2D6 substrate - 0.8296 82.96%
CYP3A4 inhibition + 0.7957 79.57%
CYP2C9 inhibition - 0.5790 57.90%
CYP2C19 inhibition + 0.6217 62.17%
CYP2D6 inhibition - 0.6187 61.87%
CYP1A2 inhibition + 0.9450 94.50%
CYP2C8 inhibition + 0.6565 65.65%
CYP inhibitory promiscuity + 0.6664 66.64%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.5499 54.99%
Eye corrosion - 0.9486 94.86%
Eye irritation + 0.9383 93.83%
Skin irritation - 0.5968 59.68%
Skin corrosion - 0.9577 95.77%
Ames mutagenesis + 0.8200 82.00%
Human Ether-a-go-go-Related Gene inhibition - 0.6636 66.36%
Micronuclear + 0.8000 80.00%
Hepatotoxicity - 0.5750 57.50%
skin sensitisation - 0.9129 91.29%
Respiratory toxicity + 0.5111 51.11%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity + 0.5750 57.50%
Nephrotoxicity - 0.5884 58.84%
Acute Oral Toxicity (c) III 0.8993 89.93%
Estrogen receptor binding + 0.9214 92.14%
Androgen receptor binding + 0.8288 82.88%
Thyroid receptor binding + 0.6657 66.57%
Glucocorticoid receptor binding + 0.9295 92.95%
Aromatase binding + 0.7627 76.27%
PPAR gamma + 0.8202 82.02%
Honey bee toxicity - 0.8954 89.54%
Biodegradation - 0.9000 90.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity - 0.3970 39.70%

Targets

Top

Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.80% 91.11%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 97.42% 95.56%
CHEMBL3192 Q9BY41 Histone deacetylase 8 94.67% 93.99%
CHEMBL1806 P11388 DNA topoisomerase II alpha 94.56% 89.00%
CHEMBL2581 P07339 Cathepsin D 94.09% 98.95%
CHEMBL2535 P11166 Glucose transporter 93.61% 98.75%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.34% 86.33%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 93.20% 94.00%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 92.82% 99.23%
CHEMBL3194 P02766 Transthyretin 85.67% 90.71%
CHEMBL3401 O75469 Pregnane X receptor 85.28% 94.73%
CHEMBL5409 Q8TDU6 G-protein coupled bile acid receptor 1 85.00% 93.65%
CHEMBL3060 Q9Y345 Glycine transporter 2 84.76% 99.17%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 84.19% 94.45%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 83.95% 95.50%
CHEMBL4306 P22460 Voltage-gated potassium channel subunit Kv1.5 83.14% 94.03%
CHEMBL1255126 O15151 Protein Mdm4 81.54% 90.20%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 81.32% 99.15%
CHEMBL2146302 O94925 Glutaminase kidney isoform, mitochondrial 80.07% 100.00%

Plants that contains it

Top
Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Annona muricata
Boehmeria dura
Canscora alata
Cirsium carolinianum
Dipentodon sinicus
Hypericum monogynum
Hypericum oblongifolium
Pericome caudata
Piper lanceifolium

Cross-Links

Top
PubChem 12026489
NPASS NPC73468
LOTUS LTS0050796
wikiData Q104953457