methyl (1S,14R,15S,16S,20S)-14-(hydroxymethyl)-16-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-17-oxa-3,13-diazapentacyclo[11.8.0.02,10.04,9.015,20]henicosa-2(10),4,6,8,18-pentaene-19-carboxylate

Details

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Internal ID 85126760-7146-4c8f-8b99-5dbc93c64668
Taxonomy Alkaloids and derivatives > Yohimbine alkaloids
IUPAC Name methyl (1S,14R,15S,16S,20S)-14-(hydroxymethyl)-16-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-17-oxa-3,13-diazapentacyclo[11.8.0.02,10.04,9.015,20]henicosa-2(10),4,6,8,18-pentaene-19-carboxylate
SMILES (Canonical) COC(=O)C1=COC(C2C1CC3C4=C(CCN3C2CO)C5=CC=CC=C5N4)OC6C(C(C(C(O6)CO)O)O)O
SMILES (Isomeric) COC(=O)C1=CO[C@H]([C@H]2[C@@H]1C[C@H]3C4=C(CCN3[C@H]2CO)C5=CC=CC=C5N4)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O
InChI InChI=1S/C27H34N2O10/c1-36-25(35)15-11-37-26(39-27-24(34)23(33)22(32)19(10-31)38-27)20-14(15)8-17-21-13(6-7-29(17)18(20)9-30)12-4-2-3-5-16(12)28-21/h2-5,11,14,17-20,22-24,26-28,30-34H,6-10H2,1H3/t14-,17+,18+,19-,20+,22-,23+,24-,26+,27+/m1/s1
InChI Key FCECVXQMCZMWDG-DCMQMPOPSA-N
Popularity 1 reference in papers

Physical and Chemical Properties

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Molecular Formula C27H34N2O10
Molecular Weight 546.60 g/mol
Exact Mass 546.22134529 g/mol
Topological Polar Surface Area (TPSA) 174.00 Ų
XlogP -0.40
Atomic LogP (AlogP) -0.71
H-Bond Acceptor 11
H-Bond Donor 6
Rotatable Bonds 5

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of methyl (1S,14R,15S,16S,20S)-14-(hydroxymethyl)-16-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-17-oxa-3,13-diazapentacyclo[11.8.0.02,10.04,9.015,20]henicosa-2(10),4,6,8,18-pentaene-19-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6675 66.75%
Caco-2 - 0.8190 81.90%
Blood Brain Barrier - 0.7750 77.50%
Human oral bioavailability - 0.8714 87.14%
Subcellular localzation Mitochondria 0.5930 59.30%
OATP2B1 inhibitior - 0.8644 86.44%
OATP1B1 inhibitior + 0.7398 73.98%
OATP1B3 inhibitior + 0.9298 92.98%
MATE1 inhibitior - 0.9000 90.00%
OCT2 inhibitior - 0.7250 72.50%
BSEP inhibitior + 0.8632 86.32%
P-glycoprotein inhibitior - 0.5000 50.00%
P-glycoprotein substrate + 0.5748 57.48%
CYP3A4 substrate + 0.7342 73.42%
CYP2C9 substrate - 0.8052 80.52%
CYP2D6 substrate - 0.7975 79.75%
CYP3A4 inhibition - 0.9764 97.64%
CYP2C9 inhibition - 0.7934 79.34%
CYP2C19 inhibition - 0.8934 89.34%
CYP2D6 inhibition - 0.8197 81.97%
CYP1A2 inhibition - 0.6547 65.47%
CYP2C8 inhibition + 0.6679 66.79%
CYP inhibitory promiscuity - 0.6783 67.83%
UGT catelyzed - 0.7000 70.00%
Carcinogenicity (binary) - 0.9900 99.00%
Carcinogenicity (trinary) Non-required 0.5853 58.53%
Eye corrosion - 0.9878 98.78%
Eye irritation - 0.9681 96.81%
Skin irritation - 0.7638 76.38%
Skin corrosion - 0.9380 93.80%
Ames mutagenesis + 0.5500 55.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7535 75.35%
Micronuclear + 0.8100 81.00%
Hepatotoxicity - 0.6198 61.98%
skin sensitisation - 0.8604 86.04%
Respiratory toxicity + 0.9000 90.00%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity - 0.5879 58.79%
Acute Oral Toxicity (c) III 0.6162 61.62%
Estrogen receptor binding + 0.8193 81.93%
Androgen receptor binding + 0.6759 67.59%
Thyroid receptor binding - 0.5392 53.92%
Glucocorticoid receptor binding - 0.4925 49.25%
Aromatase binding - 0.5222 52.22%
PPAR gamma + 0.6694 66.94%
Honey bee toxicity - 0.8248 82.48%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.7100 71.00%
Fish aquatic toxicity - 0.3631 36.31%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 99.30% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.25% 96.09%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 97.46% 85.14%
CHEMBL2581 P07339 Cathepsin D 94.15% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 93.28% 97.09%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 92.46% 95.83%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 89.80% 94.45%
CHEMBL5028 O14672 ADAM10 89.64% 97.50%
CHEMBL1806 P11388 DNA topoisomerase II alpha 88.00% 89.00%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.03% 95.56%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 86.48% 99.23%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 85.64% 86.92%
CHEMBL4208 P20618 Proteasome component C5 85.60% 90.00%
CHEMBL3060 Q9Y345 Glycine transporter 2 83.42% 99.17%
CHEMBL1293249 Q13887 Kruppel-like factor 5 81.89% 86.33%
CHEMBL1951 P21397 Monoamine oxidase A 80.59% 91.49%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Neolamarckia cadamba

Cross-Links

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PubChem 154804625
LOTUS LTS0276425
wikiData Q104993094