(2R,3R)-2-[(1S)-1-hydroxy-2-oxo-2-[[4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]methoxy]ethyl]-3-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypentanoic acid

Details

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Internal ID a2490efb-d198-45c0-a678-fc67f4d22f0e
Taxonomy Organic oxygen compounds > Organooxygen compounds > Carbohydrates and carbohydrate conjugates > Glycosyl compounds > Phenolic glycosides
IUPAC Name (2R,3R)-2-[(1S)-1-hydroxy-2-oxo-2-[[4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]methoxy]ethyl]-3-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypentanoic acid
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C27H40O17/c1-3-11(2)27(26(38)39,44-25-21(35)19(33)17(31)15(9-29)43-25)22(36)23(37)40-10-12-4-6-13(7-5-12)41-24-20(34)18(32)16(30)14(8-28)42-24/h4-7,11,14-22,24-25,28-36H,3,8-10H2,1-2H3,(H,38,39)/t11-,14-,15-,16-,17-,18+,19+,20-,21-,22-,24-,25+,27-/m1/s1
InChI Key WDUSVQPERDZPMH-GAIRLUJDSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C27H40O17
Molecular Weight 636.60 g/mol
Exact Mass 636.22654980 g/mol
Topological Polar Surface Area (TPSA) 283.00 Ų
XlogP -2.30
Atomic LogP (AlogP) -4.04
H-Bond Acceptor 16
H-Bond Donor 10
Rotatable Bonds 13

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R)-2-[(1S)-1-hydroxy-2-oxo-2-[[4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyphenyl]methoxy]ethyl]-3-methyl-2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypentanoic acid

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.7492 74.92%
Caco-2 - 0.8931 89.31%
Blood Brain Barrier - 0.5500 55.00%
Human oral bioavailability - 0.8286 82.86%
Subcellular localzation Mitochondria 0.7605 76.05%
OATP2B1 inhibitior - 0.8621 86.21%
OATP1B1 inhibitior + 0.8951 89.51%
OATP1B3 inhibitior + 0.9374 93.74%
MATE1 inhibitior - 0.9600 96.00%
OCT2 inhibitior - 0.8500 85.00%
BSEP inhibitior + 0.6412 64.12%
P-glycoprotein inhibitior - 0.4650 46.50%
P-glycoprotein substrate - 0.8032 80.32%
CYP3A4 substrate + 0.5941 59.41%
CYP2C9 substrate - 0.6056 60.56%
CYP2D6 substrate - 0.8834 88.34%
CYP3A4 inhibition - 0.8655 86.55%
CYP2C9 inhibition - 0.8387 83.87%
CYP2C19 inhibition - 0.8853 88.53%
CYP2D6 inhibition - 0.9535 95.35%
CYP1A2 inhibition - 0.8849 88.49%
CYP2C8 inhibition - 0.5983 59.83%
CYP inhibitory promiscuity - 0.8686 86.86%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9200 92.00%
Carcinogenicity (trinary) Non-required 0.6302 63.02%
Eye corrosion - 0.9908 99.08%
Eye irritation - 0.9262 92.62%
Skin irritation - 0.8562 85.62%
Skin corrosion - 0.9521 95.21%
Ames mutagenesis - 0.7100 71.00%
Human Ether-a-go-go-Related Gene inhibition + 0.6931 69.31%
Micronuclear - 0.6426 64.26%
Hepatotoxicity - 0.6500 65.00%
skin sensitisation - 0.8836 88.36%
Respiratory toxicity + 0.5556 55.56%
Reproductive toxicity + 0.5333 53.33%
Mitochondrial toxicity - 0.5625 56.25%
Nephrotoxicity - 0.8934 89.34%
Acute Oral Toxicity (c) III 0.7039 70.39%
Estrogen receptor binding + 0.7365 73.65%
Androgen receptor binding + 0.6512 65.12%
Thyroid receptor binding - 0.5376 53.76%
Glucocorticoid receptor binding - 0.5186 51.86%
Aromatase binding + 0.5422 54.22%
PPAR gamma + 0.6024 60.24%
Honey bee toxicity - 0.8044 80.44%
Biodegradation - 0.7250 72.50%
Crustacea aquatic toxicity - 0.8150 81.50%
Fish aquatic toxicity + 0.8276 82.76%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL2581 P07339 Cathepsin D 97.73% 98.95%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.71% 96.09%
CHEMBL220 P22303 Acetylcholinesterase 96.93% 94.45%
CHEMBL3060 Q9Y345 Glycine transporter 2 96.06% 99.17%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 90.47% 91.11%
CHEMBL253 P34972 Cannabinoid CB2 receptor 88.55% 97.25%
CHEMBL3401 O75469 Pregnane X receptor 87.53% 94.73%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 87.24% 94.00%
CHEMBL3091268 Q92753 Nuclear receptor ROR-beta 86.74% 95.50%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.52% 95.89%
CHEMBL2179 P04062 Beta-glucocerebrosidase 86.15% 85.31%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 86.14% 94.45%
CHEMBL3892 Q99500 Sphingosine 1-phosphate receptor Edg-3 85.70% 97.29%
CHEMBL5608 Q16288 NT-3 growth factor receptor 85.62% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 85.46% 97.09%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 84.22% 95.56%
CHEMBL221 P23219 Cyclooxygenase-1 83.40% 90.17%
CHEMBL3437 Q16853 Amine oxidase, copper containing 82.86% 94.00%
CHEMBL4051 P13569 Cystic fibrosis transmembrane conductance regulator 81.31% 95.71%
CHEMBL3359 P21462 Formyl peptide receptor 1 81.19% 93.56%
CHEMBL1860 P10827 Thyroid hormone receptor alpha 81.05% 99.15%
CHEMBL1293249 Q13887 Kruppel-like factor 5 80.67% 86.33%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Gymnadenia conopsea

Cross-Links

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PubChem 154496363
LOTUS LTS0205789
wikiData Q105302704