(2S,3R,4R,5R,6S)-2-[(2S,3R,4S,5R)-2-[[(3R,3aS,4S,5aR,5bR,7S,7aR,9S,11aR,11bR,13aR,13bR)-4,7-dihydroxy-5a,5b,8,8,11a,13b-hexamethyl-3-[2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypropan-2-yl]-1,2,3,3a,4,5,6,7,7a,9,10,11,11b,12,13,13a-hexadecahydrocyclopenta[a]chrysen-9-yl]oxy]-4,5-dihydroxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID ca1cef8d-4ef5-419d-bee9-d486a1bf8b48
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2S,3R,4R,5R,6S)-2-[(2S,3R,4S,5R)-2-[[(3R,3aS,4S,5aR,5bR,7S,7aR,9S,11aR,11bR,13aR,13bR)-4,7-dihydroxy-5a,5b,8,8,11a,13b-hexamethyl-3-[2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypropan-2-yl]-1,2,3,3a,4,5,6,7,7a,9,10,11,11b,12,13,13a-hexadecahydrocyclopenta[a]chrysen-9-yl]oxy]-4,5-dihydroxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C47H80O17/c1-20-30(52)33(55)35(57)39(60-20)63-37-31(53)24(51)19-59-41(37)62-28-13-15-45(7)27-11-10-26-44(6)14-12-21(43(4,5)64-40-36(58)34(56)32(54)25(18-48)61-40)29(44)22(49)16-46(26,8)47(27,9)17-23(50)38(45)42(28,2)3/h20-41,48-58H,10-19H2,1-9H3/t20-,21+,22-,23-,24+,25+,26+,27+,28-,29+,30-,31-,32+,33+,34-,35+,36+,37+,38-,39-,40-,41-,44+,45+,46+,47+/m0/s1
InChI Key PDYIYMDSEUXDKP-UGIMMQHPSA-N
Popularity 2 references in papers

Physical and Chemical Properties

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Molecular Formula C47H80O17
Molecular Weight 917.10 g/mol
Exact Mass 916.53955108 g/mol
Topological Polar Surface Area (TPSA) 278.00 Ų
XlogP 1.50
Atomic LogP (AlogP) 0.30
H-Bond Acceptor 17
H-Bond Donor 11
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2S,3R,4R,5R,6S)-2-[(2S,3R,4S,5R)-2-[[(3R,3aS,4S,5aR,5bR,7S,7aR,9S,11aR,11bR,13aR,13bR)-4,7-dihydroxy-5a,5b,8,8,11a,13b-hexamethyl-3-[2-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxypropan-2-yl]-1,2,3,3a,4,5,6,7,7a,9,10,11,11b,12,13,13a-hexadecahydrocyclopenta[a]chrysen-9-yl]oxy]-4,5-dihydroxyoxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5073 50.73%
Caco-2 - 0.8858 88.58%
Blood Brain Barrier - 0.5750 57.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.6483 64.83%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8427 84.27%
OATP1B3 inhibitior + 0.8916 89.16%
MATE1 inhibitior - 0.9612 96.12%
OCT2 inhibitior - 0.5250 52.50%
BSEP inhibitior - 0.5000 50.00%
P-glycoprotein inhibitior + 0.7540 75.40%
P-glycoprotein substrate - 0.5591 55.91%
CYP3A4 substrate + 0.7302 73.02%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8203 82.03%
CYP3A4 inhibition - 0.9558 95.58%
CYP2C9 inhibition - 0.8950 89.50%
CYP2C19 inhibition - 0.8957 89.57%
CYP2D6 inhibition - 0.9593 95.93%
CYP1A2 inhibition - 0.9207 92.07%
CYP2C8 inhibition + 0.6549 65.49%
CYP inhibitory promiscuity - 0.9729 97.29%
UGT catelyzed + 0.8000 80.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6776 67.76%
Eye corrosion - 0.9912 99.12%
Eye irritation - 0.9042 90.42%
Skin irritation - 0.7045 70.45%
Skin corrosion - 0.9555 95.55%
Ames mutagenesis - 0.6570 65.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7636 76.36%
Micronuclear - 0.9000 90.00%
Hepatotoxicity - 0.6351 63.51%
skin sensitisation - 0.9339 93.39%
Respiratory toxicity + 0.5778 57.78%
Reproductive toxicity + 0.7444 74.44%
Mitochondrial toxicity - 0.6000 60.00%
Nephrotoxicity - 0.9616 96.16%
Acute Oral Toxicity (c) I 0.6587 65.87%
Estrogen receptor binding + 0.7446 74.46%
Androgen receptor binding + 0.7461 74.61%
Thyroid receptor binding - 0.5454 54.54%
Glucocorticoid receptor binding + 0.6440 64.40%
Aromatase binding + 0.6624 66.24%
PPAR gamma + 0.7467 74.67%
Honey bee toxicity - 0.6186 61.86%
Biodegradation - 0.7750 77.50%
Crustacea aquatic toxicity - 0.5800 58.00%
Fish aquatic toxicity + 0.7773 77.73%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL253 P34972 Cannabinoid CB2 receptor 98.96% 97.25%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.65% 91.11%
CHEMBL218 P21554 Cannabinoid CB1 receptor 96.85% 96.61%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.54% 96.09%
CHEMBL226 P30542 Adenosine A1 receptor 93.31% 95.93%
CHEMBL1293249 Q13887 Kruppel-like factor 5 93.09% 86.33%
CHEMBL3137262 O60341 LSD1/CoREST complex 92.32% 97.09%
CHEMBL241 Q14432 Phosphodiesterase 3A 92.28% 92.94%
CHEMBL3714130 P46095 G-protein coupled receptor 6 91.80% 97.36%
CHEMBL1937 Q92769 Histone deacetylase 2 91.51% 94.75%
CHEMBL2581 P07339 Cathepsin D 91.38% 98.95%
CHEMBL1907605 P24864 Cyclin-dependent kinase 2/cyclin E1 90.26% 92.88%
CHEMBL5608 Q16288 NT-3 growth factor receptor 88.52% 95.89%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 86.39% 97.86%
CHEMBL1806 P11388 DNA topoisomerase II alpha 86.12% 89.00%
CHEMBL2815 P04629 Nerve growth factor receptor Trk-A 84.77% 87.16%
CHEMBL4478 Q00975 Voltage-gated N-type calcium channel alpha-1B subunit 84.30% 97.14%
CHEMBL1994 P08235 Mineralocorticoid receptor 84.08% 100.00%
CHEMBL3589 P55263 Adenosine kinase 84.05% 98.05%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 84.01% 96.77%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 82.06% 95.83%
CHEMBL1907602 P06493 Cyclin-dependent kinase 1/cyclin B1 81.97% 91.24%
CHEMBL5888 Q99558 Mitogen-activated protein kinase kinase kinase 14 80.99% 100.00%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.97% 94.00%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 80.89% 100.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Glinus lotoides

Cross-Links

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PubChem 21580507
LOTUS LTS0205121
wikiData Q105206823