(2R,3R,4S,5S,6R)-4-[(2S,3R,4R,5S,6R)-5-[(2S,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-[[(1S,2S,4S,5R,8R,9R,10S,13S,14R,17S,18R)-2-hydroxy-9-(hydroxymethyl)-4,5,9,13,20,20-hexamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracos-15-en-10-yl]oxy]-6-methyloxane-3,5-diol

Details

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Internal ID 22f87cc5-103b-4916-82c8-d64b89da4025
Taxonomy Lipids and lipid-like molecules > Prenol lipids > Terpene glycosides > Triterpene glycosides > Triterpene saponins
IUPAC Name (2R,3R,4S,5S,6R)-4-[(2S,3R,4R,5S,6R)-5-[(2S,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-[[(1S,2S,4S,5R,8R,9R,10S,13S,14R,17S,18R)-2-hydroxy-9-(hydroxymethyl)-4,5,9,13,20,20-hexamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracos-15-en-10-yl]oxy]-6-methyloxane-3,5-diol
SMILES (Canonical) CC1C(C(C(C(O1)OC2CCC3(C(C2(C)CO)CCC4(C3C=CC56C4(CC(C7(C5CC(CC7)(C)C)CO6)O)C)C)C)O)OC8C(C(C(C(O8)CO)OC9C(C(C(O9)CO)O)O)O)O)O
SMILES (Isomeric) C[C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O[C@H]2CC[C@]3([C@H]([C@]2(C)CO)CC[C@@]4([C@@H]3C=C[C@@]56[C@]4(C[C@@H]([C@@]7([C@H]5CC(CC7)(C)C)CO6)O)C)C)C)O)O[C@H]8[C@@H]([C@H]([C@@H]([C@H](O8)CO)O[C@H]9[C@@H]([C@H]([C@H](O9)CO)O)O)O)O)O
InChI InChI=1S/C47H76O17/c1-22-30(52)37(64-39-34(56)32(54)36(24(19-49)61-39)63-38-33(55)31(53)23(18-48)60-38)35(57)40(59-22)62-29-10-11-42(4)25(43(29,5)20-50)8-12-44(6)26(42)9-13-47-27-16-41(2,3)14-15-46(27,21-58-47)28(51)17-45(44,47)7/h9,13,22-40,48-57H,8,10-12,14-21H2,1-7H3/t22-,23-,24-,25-,26-,27-,28+,29+,30+,31+,32-,33-,34-,35-,36-,37+,38+,39+,40+,42+,43+,44-,45+,46-,47+/m1/s1
InChI Key LUEUPNRBTRDIFC-KKDWJXBYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C47H76O17
Molecular Weight 913.10 g/mol
Exact Mass 912.50825095 g/mol
Topological Polar Surface Area (TPSA) 267.00 Ų
XlogP 1.00
Atomic LogP (AlogP) 0.24
H-Bond Acceptor 17
H-Bond Donor 10
Rotatable Bonds 9

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of (2R,3R,4S,5S,6R)-4-[(2S,3R,4R,5S,6R)-5-[(2S,3R,4R,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3,4-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-2-[[(1S,2S,4S,5R,8R,9R,10S,13S,14R,17S,18R)-2-hydroxy-9-(hydroxymethyl)-4,5,9,13,20,20-hexamethyl-24-oxahexacyclo[15.5.2.01,18.04,17.05,14.08,13]tetracos-15-en-10-yl]oxy]-6-methyloxane-3,5-diol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.6441 64.41%
Caco-2 - 0.8826 88.26%
Blood Brain Barrier - 0.6000 60.00%
Human oral bioavailability - 0.7857 78.57%
Subcellular localzation Mitochondria 0.6663 66.63%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.8407 84.07%
OATP1B3 inhibitior + 0.9158 91.58%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.7155 71.55%
P-glycoprotein inhibitior + 0.7474 74.74%
P-glycoprotein substrate + 0.5382 53.82%
CYP3A4 substrate + 0.7272 72.72%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.8287 82.87%
CYP3A4 inhibition - 0.9390 93.90%
CYP2C9 inhibition - 0.8634 86.34%
CYP2C19 inhibition - 0.8659 86.59%
CYP2D6 inhibition - 0.9457 94.57%
CYP1A2 inhibition - 0.9115 91.15%
CYP2C8 inhibition + 0.6976 69.76%
CYP inhibitory promiscuity - 0.9473 94.73%
UGT catelyzed + 0.7000 70.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6210 62.10%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9055 90.55%
Skin irritation - 0.6612 66.12%
Skin corrosion - 0.9452 94.52%
Ames mutagenesis - 0.6770 67.70%
Human Ether-a-go-go-Related Gene inhibition + 0.7605 76.05%
Micronuclear - 0.8900 89.00%
Hepatotoxicity - 0.5939 59.39%
skin sensitisation - 0.9108 91.08%
Respiratory toxicity - 0.5111 51.11%
Reproductive toxicity + 0.6889 68.89%
Mitochondrial toxicity - 0.5875 58.75%
Nephrotoxicity - 0.7976 79.76%
Acute Oral Toxicity (c) I 0.7129 71.29%
Estrogen receptor binding + 0.7899 78.99%
Androgen receptor binding + 0.7569 75.69%
Thyroid receptor binding - 0.5501 55.01%
Glucocorticoid receptor binding + 0.6767 67.67%
Aromatase binding + 0.6598 65.98%
PPAR gamma + 0.7840 78.40%
Honey bee toxicity - 0.6455 64.55%
Biodegradation - 0.7000 70.00%
Crustacea aquatic toxicity - 0.5300 53.00%
Fish aquatic toxicity + 0.9152 91.52%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.43% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 95.07% 96.09%
CHEMBL3714130 P46095 G-protein coupled receptor 6 94.80% 97.36%
CHEMBL226 P30542 Adenosine A1 receptor 94.34% 95.93%
CHEMBL3137262 O60341 LSD1/CoREST complex 91.99% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 91.53% 94.45%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.77% 86.33%
CHEMBL5608 Q16288 NT-3 growth factor receptor 90.73% 95.89%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 89.21% 95.50%
CHEMBL4005 P42336 PI3-kinase p110-alpha subunit 87.55% 97.47%
CHEMBL1994 P08235 Mineralocorticoid receptor 87.29% 100.00%
CHEMBL241 Q14432 Phosphodiesterase 3A 85.79% 92.94%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.70% 89.00%
CHEMBL1914 P06276 Butyrylcholinesterase 84.50% 95.00%
CHEMBL4685 P14902 Indoleamine 2,3-dioxygenase 84.23% 96.38%
CHEMBL2842 P42345 Serine/threonine-protein kinase mTOR 83.07% 92.78%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 82.71% 97.86%
CHEMBL2243 O00519 Anandamide amidohydrolase 82.65% 97.53%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 82.24% 98.99%
CHEMBL2581 P07339 Cathepsin D 80.94% 98.95%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 80.93% 94.00%
CHEMBL4227 P25090 Lipoxin A4 receptor 80.37% 100.00%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 80.20% 93.04%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Scrophularia kakudensis

Cross-Links

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PubChem 162851468
LOTUS LTS0066319
wikiData Q105157384