Methyl 3beta-hydroxy-16-methoxy-1-methyl-6,7-didehydro-2beta,5alpha,12beta,19alpha-aspidospermidine-3alpha-carboxylate

Details

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Internal ID ac2d823d-2d95-4e7c-8712-ba40bb90719d
Taxonomy Alkaloids and derivatives > Plumeran-type alkaloids
IUPAC Name methyl (1S,9R,10R,12R,19S)-12-ethyl-10-hydroxy-5-methoxy-8-methyl-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2(7),3,5,13-tetraene-10-carboxylate
SMILES (Canonical) CCC12CC(C3C4(C1N(CC4)CC=C2)C5=C(N3C)C=C(C=C5)OC)(C(=O)OC)O
SMILES (Isomeric) CC[C@]12C[C@@]([C@H]3[C@]4([C@H]1N(CC4)CC=C2)C5=C(N3C)C=C(C=C5)OC)(C(=O)OC)O
InChI InChI=1S/C23H30N2O4/c1-5-21-9-6-11-25-12-10-22(18(21)25)16-8-7-15(28-3)13-17(16)24(2)19(22)23(27,14-21)20(26)29-4/h6-9,13,18-19,27H,5,10-12,14H2,1-4H3/t18-,19+,21-,22-,23+/m0/s1
InChI Key WNKDGPXNFMMOEJ-UCBRCEGISA-N
Popularity 4 references in papers

Physical and Chemical Properties

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Molecular Formula C23H30N2O4
Molecular Weight 398.50 g/mol
Exact Mass 398.22055744 g/mol
Topological Polar Surface Area (TPSA) 62.20 Ų
XlogP 2.80
Atomic LogP (AlogP) 2.10
H-Bond Acceptor 6
H-Bond Donor 1
Rotatable Bonds 3

Synonyms

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Q27102152

2D Structure

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2D Structure of Methyl 3beta-hydroxy-16-methoxy-1-methyl-6,7-didehydro-2beta,5alpha,12beta,19alpha-aspidospermidine-3alpha-carboxylate

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9126 91.26%
Caco-2 + 0.7288 72.88%
Blood Brain Barrier + 0.8500 85.00%
Human oral bioavailability - 0.5000 50.00%
Subcellular localzation Mitochondria 0.6062 60.62%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9052 90.52%
OATP1B3 inhibitior + 0.9354 93.54%
MATE1 inhibitior - 0.8800 88.00%
OCT2 inhibitior - 0.5000 50.00%
BSEP inhibitior + 0.8513 85.13%
P-glycoprotein inhibitior + 0.7498 74.98%
P-glycoprotein substrate + 0.8448 84.48%
CYP3A4 substrate + 0.6699 66.99%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.3812 38.12%
CYP3A4 inhibition - 0.9316 93.16%
CYP2C9 inhibition - 0.9342 93.42%
CYP2C19 inhibition - 0.7904 79.04%
CYP2D6 inhibition + 0.6090 60.90%
CYP1A2 inhibition - 0.9317 93.17%
CYP2C8 inhibition - 0.7133 71.33%
CYP inhibitory promiscuity - 0.8304 83.04%
UGT catelyzed + 0.6000 60.00%
Carcinogenicity (binary) - 0.9700 97.00%
Carcinogenicity (trinary) Non-required 0.6069 60.69%
Eye corrosion - 0.9900 99.00%
Eye irritation - 0.9797 97.97%
Skin irritation - 0.7955 79.55%
Skin corrosion - 0.9441 94.41%
Ames mutagenesis - 0.5800 58.00%
Human Ether-a-go-go-Related Gene inhibition + 0.7555 75.55%
Micronuclear + 0.6400 64.00%
Hepatotoxicity - 0.5176 51.76%
skin sensitisation - 0.8546 85.46%
Respiratory toxicity + 0.9111 91.11%
Reproductive toxicity + 0.9444 94.44%
Mitochondrial toxicity + 0.9250 92.50%
Nephrotoxicity - 0.9001 90.01%
Acute Oral Toxicity (c) III 0.7073 70.73%
Estrogen receptor binding + 0.7807 78.07%
Androgen receptor binding + 0.7954 79.54%
Thyroid receptor binding + 0.6768 67.68%
Glucocorticoid receptor binding + 0.7480 74.80%
Aromatase binding + 0.6232 62.32%
PPAR gamma + 0.5888 58.88%
Honey bee toxicity - 0.9099 90.99%
Biodegradation - 0.9500 95.00%
Crustacea aquatic toxicity - 0.6600 66.00%
Fish aquatic toxicity + 0.8657 86.57%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.50% 96.09%
CHEMBL4208 P20618 Proteasome component C5 97.56% 90.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 96.44% 91.11%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 94.64% 85.14%
CHEMBL2635 P51452 Dual specificity protein phosphatase 3 90.87% 94.00%
CHEMBL1293249 Q13887 Kruppel-like factor 5 90.69% 86.33%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 87.86% 95.56%
CHEMBL3864 Q06124 Protein-tyrosine phosphatase 2C 87.44% 94.42%
CHEMBL2581 P07339 Cathepsin D 86.93% 98.95%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.13% 97.09%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 85.21% 94.45%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 84.77% 92.62%
CHEMBL5469 Q14289 Protein tyrosine kinase 2 beta 84.42% 91.03%
CHEMBL5608 Q16288 NT-3 growth factor receptor 84.33% 95.89%
CHEMBL205 P00918 Carbonic anhydrase II 83.55% 98.44%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 82.68% 90.71%
CHEMBL4895 P30530 Tyrosine-protein kinase receptor UFO 82.59% 90.95%
CHEMBL2146302 O94925 Glutaminase kidney isoform, mitochondrial 82.40% 100.00%
CHEMBL221 P23219 Cyclooxygenase-1 81.97% 90.17%
CHEMBL340 P08684 Cytochrome P450 3A4 81.61% 91.19%
CHEMBL3085 P43003 Excitatory amino acid transporter 1 81.59% 94.67%
CHEMBL3476 O15111 Inhibitor of nuclear factor kappa B kinase alpha subunit 80.47% 95.83%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Catharanthus roseus

Cross-Links

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PubChem 5460099
LOTUS LTS0227431
wikiData Q27102152