2-[2-[4,5-Dihydroxy-6-(hydroxymethyl)-2-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl)oxyoxan-3-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-methyloxane-3,4,5-triol

Details

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Internal ID d1256c8e-8004-4435-8262-abdcfc7724a5
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroidal glycosides > Steroidal saponins
IUPAC Name 2-[2-[4,5-dihydroxy-6-(hydroxymethyl)-2-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl)oxyoxan-3-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-methyloxane-3,4,5-triol
SMILES (Canonical)
SMILES (Isomeric)
InChI InChI=1S/C45H74O17/c1-19-8-13-45(55-18-19)20(2)30-27(62-45)15-26-24-7-6-22-14-23(9-11-43(22,4)25(24)10-12-44(26,30)5)57-41-38(35(52)32(49)28(16-46)58-41)61-42-39(36(53)33(50)29(17-47)59-42)60-40-37(54)34(51)31(48)21(3)56-40/h19-42,46-54H,6-18H2,1-5H3
InChI Key ORUHTOWUUFYULF-UHFFFAOYSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C45H74O17
Molecular Weight 887.10 g/mol
Exact Mass 886.49260089 g/mol
Topological Polar Surface Area (TPSA) 256.00 Ų
XlogP 2.20
Atomic LogP (AlogP) 0.29
H-Bond Acceptor 17
H-Bond Donor 9
Rotatable Bonds 8

Synonyms

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There are no found synonyms.

2D Structure

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2D Structure of 2-[2-[4,5-Dihydroxy-6-(hydroxymethyl)-2-(5',7,9,13-tetramethylspiro[5-oxapentacyclo[10.8.0.02,9.04,8.013,18]icosane-6,2'-oxane]-16-yl)oxyoxan-3-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]oxy-6-methyloxane-3,4,5-triol

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption - 0.5917 59.17%
Caco-2 - 0.8876 88.76%
Blood Brain Barrier - 0.6750 67.50%
Human oral bioavailability - 0.8000 80.00%
Subcellular localzation Mitochondria 0.6898 68.98%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9199 91.99%
OATP1B3 inhibitior + 0.9448 94.48%
MATE1 inhibitior - 0.9800 98.00%
OCT2 inhibitior + 0.5750 57.50%
BSEP inhibitior + 0.6264 62.64%
P-glycoprotein inhibitior + 0.7288 72.88%
P-glycoprotein substrate - 0.7268 72.68%
CYP3A4 substrate + 0.7419 74.19%
CYP2C9 substrate - 0.8054 80.54%
CYP2D6 substrate - 0.8164 81.64%
CYP3A4 inhibition - 0.9611 96.11%
CYP2C9 inhibition - 0.9091 90.91%
CYP2C19 inhibition - 0.8819 88.19%
CYP2D6 inhibition - 0.9566 95.66%
CYP1A2 inhibition - 0.9089 90.89%
CYP2C8 inhibition + 0.6230 62.30%
CYP inhibitory promiscuity - 0.9291 92.91%
UGT catelyzed - 0.6000 60.00%
Carcinogenicity (binary) - 0.9800 98.00%
Carcinogenicity (trinary) Non-required 0.6271 62.71%
Eye corrosion - 0.9909 99.09%
Eye irritation - 0.9126 91.26%
Skin irritation - 0.7119 71.19%
Skin corrosion - 0.9532 95.32%
Ames mutagenesis - 0.8054 80.54%
Human Ether-a-go-go-Related Gene inhibition + 0.7715 77.15%
Micronuclear - 0.9200 92.00%
Hepatotoxicity - 0.9375 93.75%
skin sensitisation - 0.9466 94.66%
Respiratory toxicity + 0.7667 76.67%
Reproductive toxicity + 0.6222 62.22%
Mitochondrial toxicity - 0.5250 52.50%
Nephrotoxicity - 0.8021 80.21%
Acute Oral Toxicity (c) I 0.7761 77.61%
Estrogen receptor binding + 0.8068 80.68%
Androgen receptor binding + 0.6756 67.56%
Thyroid receptor binding - 0.6215 62.15%
Glucocorticoid receptor binding - 0.5000 50.00%
Aromatase binding + 0.6456 64.56%
PPAR gamma + 0.7127 71.27%
Honey bee toxicity - 0.5298 52.98%
Biodegradation - 0.8000 80.00%
Crustacea aquatic toxicity - 0.5100 51.00%
Fish aquatic toxicity + 0.8210 82.10%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 97.96% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 97.03% 91.11%
CHEMBL3137262 O60341 LSD1/CoREST complex 95.33% 97.09%
CHEMBL237 P41145 Kappa opioid receptor 94.72% 98.10%
CHEMBL233 P35372 Mu opioid receptor 93.63% 97.93%
CHEMBL1163125 O60885 Bromodomain-containing protein 4 92.64% 97.31%
CHEMBL1994 P08235 Mineralocorticoid receptor 91.61% 100.00%
CHEMBL218 P21554 Cannabinoid CB1 receptor 90.39% 96.61%
CHEMBL4187 Q99250 Sodium channel protein type II alpha subunit 89.90% 95.50%
CHEMBL4681 P42330 Aldo-keto-reductase family 1 member C3 89.87% 89.05%
CHEMBL4618 P09960 Leukotriene A4 hydrolase 89.84% 97.86%
CHEMBL3880 P07900 Heat shock protein HSP 90-alpha 89.58% 96.21%
CHEMBL2955 O95136 Sphingosine 1-phosphate receptor Edg-5 89.55% 92.86%
CHEMBL226 P30542 Adenosine A1 receptor 88.90% 95.93%
CHEMBL253 P34972 Cannabinoid CB2 receptor 87.90% 97.25%
CHEMBL241 Q14432 Phosphodiesterase 3A 87.63% 92.94%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 87.16% 94.45%
CHEMBL1907603 Q05586 Glutamate NMDA receptor; GRIN1/GRIN2B 86.47% 95.89%
CHEMBL5255 O00206 Toll-like receptor 4 86.45% 92.50%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 86.43% 97.50%
CHEMBL6136 O60341 Lysine-specific histone demethylase 1 85.81% 95.58%
CHEMBL1806 P11388 DNA topoisomerase II alpha 85.62% 89.00%
CHEMBL2107 P61073 C-X-C chemokine receptor type 4 83.65% 93.10%
CHEMBL2274 Q9H228 Sphingosine 1-phosphate receptor Edg-8 83.63% 100.00%
CHEMBL5608 Q16288 NT-3 growth factor receptor 83.46% 95.89%
CHEMBL2094135 Q96BI3 Gamma-secretase 82.72% 98.05%
CHEMBL1907601 P11802 Cyclin-dependent kinase 4/cyclin D1 82.28% 98.99%
CHEMBL2534 O15530 3-phosphoinositide dependent protein kinase-1 82.25% 95.36%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 81.80% 96.77%
CHEMBL5524 Q99873 Protein-arginine N-methyltransferase 1 81.47% 96.67%
CHEMBL4016 P42262 Glutamate receptor ionotropic, AMPA 2 80.88% 86.92%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Smilax aspera

Cross-Links

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PubChem 162989155
LOTUS LTS0250829
wikiData Q105198456