(+)-3,4-Didehydrocoronaridine

Details

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Internal ID bdb447d9-bcda-4adc-ade3-22fe78248dc0
Taxonomy Alkaloids and derivatives > Ibogan-type alkaloids
IUPAC Name methyl (1R,18R)-17-ethyl-3,13-diazapentacyclo[13.3.1.02,10.04,9.013,18]nonadeca-2(10),4,6,8,16-pentaene-1-carboxylate
SMILES (Canonical) CCC1=CC2CC3(C1N(C2)CCC4=C3NC5=CC=CC=C45)C(=O)OC
SMILES (Isomeric) CCC1=CC2C[C@]3([C@@H]1N(C2)CCC4=C3NC5=CC=CC=C45)C(=O)OC
InChI InChI=1S/C21H24N2O2/c1-3-14-10-13-11-21(20(24)25-2)18-16(8-9-23(12-13)19(14)21)15-6-4-5-7-17(15)22-18/h4-7,10,13,19,22H,3,8-9,11-12H2,1-2H3/t13?,19-,21+/m1/s1
InChI Key CMKFQVZJOWHHDV-QYWJTTNJSA-N
Popularity 3 references in papers

Physical and Chemical Properties

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Molecular Formula C21H24N2O2
Molecular Weight 336.40 g/mol
Exact Mass 336.183778013 g/mol
Topological Polar Surface Area (TPSA) 45.30 Ų
XlogP 2.80
Atomic LogP (AlogP) 3.18
H-Bond Acceptor 3
H-Bond Donor 1
Rotatable Bonds 2

Synonyms

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(+)-3,4-Didehydrocoronaridine
EINECS 219-586-6
MEGxp0_001781
CHEMBL1418171
Methyl (2alpha,5beta,6alpha)-3,4-didehydroibogamine-18beta-carboxylate
ACon1_000017
(2-alpha,5-beta,6-alpha,18-beta)-3,4-Didehydroibogamine-18-carboxylic acid methyl ester
CMKFQVZJOWHHDV-QYWJTTNJSA-N
Methyl (2-alpha,5-beta,6-alpha,18-beta)-3,4-didehydroibogamine-18-carboxylate
HY-N0252
There are more than 10 synonyms. If you wish to see them all click here.

2D Structure

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2D Structure of (+)-3,4-Didehydrocoronaridine

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9794 97.94%
Caco-2 + 0.8812 88.12%
Blood Brain Barrier + 0.9000 90.00%
Human oral bioavailability - 0.7000 70.00%
Subcellular localzation Mitochondria 0.7174 71.74%
OATP2B1 inhibitior - 0.8548 85.48%
OATP1B1 inhibitior + 0.9029 90.29%
OATP1B3 inhibitior + 0.9368 93.68%
MATE1 inhibitior - 0.7037 70.37%
OCT2 inhibitior + 0.5250 52.50%
BSEP inhibitior + 0.9034 90.34%
P-glycoprotein inhibitior + 0.8866 88.66%
P-glycoprotein substrate + 0.9306 93.06%
CYP3A4 substrate + 0.6895 68.95%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate + 0.3988 39.88%
CYP3A4 inhibition + 0.6261 62.61%
CYP2C9 inhibition - 0.5098 50.98%
CYP2C19 inhibition - 0.7961 79.61%
CYP2D6 inhibition + 0.6453 64.53%
CYP1A2 inhibition - 0.6939 69.39%
CYP2C8 inhibition - 0.6371 63.71%
CYP inhibitory promiscuity + 0.6033 60.33%
UGT catelyzed - 0.0000 0.00%
Carcinogenicity (binary) - 0.9400 94.00%
Carcinogenicity (trinary) Non-required 0.6995 69.95%
Eye corrosion - 0.9902 99.02%
Eye irritation - 0.9901 99.01%
Skin irritation - 0.7854 78.54%
Skin corrosion - 0.9379 93.79%
Ames mutagenesis - 0.6800 68.00%
Human Ether-a-go-go-Related Gene inhibition + 0.8272 82.72%
Micronuclear + 0.5900 59.00%
Hepatotoxicity - 0.6875 68.75%
skin sensitisation - 0.8364 83.64%
Respiratory toxicity + 0.8667 86.67%
Reproductive toxicity + 0.9333 93.33%
Mitochondrial toxicity + 0.9375 93.75%
Nephrotoxicity - 0.7930 79.30%
Acute Oral Toxicity (c) III 0.5161 51.61%
Estrogen receptor binding + 0.6076 60.76%
Androgen receptor binding + 0.6489 64.89%
Thyroid receptor binding - 0.4879 48.79%
Glucocorticoid receptor binding + 0.6100 61.00%
Aromatase binding + 0.5585 55.85%
PPAR gamma - 0.5777 57.77%
Honey bee toxicity - 0.8048 80.48%
Biodegradation - 0.8750 87.50%
Crustacea aquatic toxicity + 0.5400 54.00%
Fish aquatic toxicity + 0.9646 96.46%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
CHEMBL1075138 Q9NUW8 Tyrosyl-DNA phosphodiesterase 1 31622.8 nM
Potency
via CMAUP

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 99.43% 96.09%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 98.34% 91.11%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 98.10% 94.45%
CHEMBL2581 P07339 Cathepsin D 96.92% 98.95%
CHEMBL255 P29275 Adenosine A2b receptor 95.54% 98.59%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 92.69% 95.56%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 91.74% 85.14%
CHEMBL2535 P11166 Glucose transporter 90.18% 98.75%
CHEMBL3430907 Q96GD4 Aurora kinase B/Inner centromere protein 87.37% 97.50%
CHEMBL5028 O14672 ADAM10 86.60% 97.50%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.30% 97.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 85.92% 97.25%
CHEMBL3310 Q96DB2 Histone deacetylase 11 85.64% 88.56%
CHEMBL256 P0DMS8 Adenosine A3 receptor 83.19% 95.93%
CHEMBL3038477 P67870 Casein kinase II alpha/beta 83.19% 99.23%
CHEMBL221 P23219 Cyclooxygenase-1 82.07% 90.17%
CHEMBL5608 Q16288 NT-3 growth factor receptor 81.27% 95.89%
CHEMBL1821 P08173 Muscarinic acetylcholine receptor M4 80.48% 94.08%
CHEMBL2373 P21730 C5a anaphylatoxin chemotactic receptor 80.19% 92.62%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Catharanthus roseus

Cross-Links

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PubChem 5315744
NPASS NPC314333
ChEMBL CHEMBL1418171