Xysmalogenin

Details

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Internal ID e0a138ca-7a7c-49d8-b485-c439d70f6dab
Taxonomy Lipids and lipid-like molecules > Steroids and steroid derivatives > Steroid lactones
IUPAC Name 3-[(3S,8R,9S,10R,13R,14S,17R)-3,14-dihydroxy-10,13-dimethyl-1,2,3,4,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-17-yl]-2H-furan-5-one
SMILES (Canonical) CC12CCC(CC1=CCC3C2CCC4(C3(CCC4C5=CC(=O)OC5)O)C)O
SMILES (Isomeric) C[C@]12CC[C@@H](CC1=CC[C@@H]3[C@@H]2CC[C@]4([C@@]3(CC[C@@H]4C5=CC(=O)OC5)O)C)O
InChI InChI=1S/C23H32O4/c1-21-8-5-16(24)12-15(21)3-4-19-18(21)6-9-22(2)17(7-10-23(19,22)26)14-11-20(25)27-13-14/h3,11,16-19,24,26H,4-10,12-13H2,1-2H3/t16-,17+,18-,19+,21-,22+,23-/m0/s1
InChI Key ZICGJBPBLVXOBM-MITUEXOSSA-N
Popularity 0 references in papers

Physical and Chemical Properties

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Molecular Formula C23H32O4
Molecular Weight 372.50 g/mol
Exact Mass 372.23005950 g/mol
Topological Polar Surface Area (TPSA) 66.80 Ų
XlogP 2.50
Atomic LogP (AlogP) 3.52
H-Bond Acceptor 4
H-Bond Donor 2
Rotatable Bonds 1

Synonyms

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508-92-9
5-Dehydrouzarigenin
BRN 0051836
4-18-00-01602 (Beilstein Handbook Reference)
(3-beta)-3,14-Dihydroxycarda-5,20(22)-dienolide
CARDA-5,20(22)-DIENOLIDE, 3-beta,14-DIHYDROXY-
Carda-5,20(22)-dienolide, 3,14-dihydroxy-, (3-beta)- (9CI)
Carda-5,20(22)-dienolide, 3,14-dihydroxy-, (3-beta)-
AKOS040754489
3-[(3S,8R,9S,10R,13R,14S,17R)-3,14-dihydroxy-10,13-dimethyl-1,2,3,4,7,8,9,11,12,15,16,17-dodecahydrocyclopenta[a]phenanthren-17-yl]-2H-furan-5-one

2D Structure

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2D Structure of Xysmalogenin

3D Structure

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ADMET Properties (via admetSAR 2)

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Target Value Probability (raw) Probability (%)
Human Intestinal Absorption + 0.9954 99.54%
Caco-2 + 0.6190 61.90%
Blood Brain Barrier - 0.6645 66.45%
Human oral bioavailability - 0.5286 52.86%
Subcellular localzation Mitochondria 0.8772 87.72%
OATP2B1 inhibitior - 1.0000 100.00%
OATP1B1 inhibitior + 0.9392 93.92%
OATP1B3 inhibitior + 0.9750 97.50%
MATE1 inhibitior - 0.9400 94.00%
OCT2 inhibitior - 0.5993 59.93%
BSEP inhibitior + 0.9045 90.45%
P-glycoprotein inhibitior - 0.7973 79.73%
P-glycoprotein substrate + 0.6346 63.46%
CYP3A4 substrate + 0.6771 67.71%
CYP2C9 substrate - 1.0000 100.00%
CYP2D6 substrate - 0.9060 90.60%
CYP3A4 inhibition - 0.7126 71.26%
CYP2C9 inhibition - 0.9278 92.78%
CYP2C19 inhibition - 0.9262 92.62%
CYP2D6 inhibition - 0.9180 91.80%
CYP1A2 inhibition - 0.8830 88.30%
CYP2C8 inhibition - 0.6316 63.16%
CYP inhibitory promiscuity - 0.8748 87.48%
UGT catelyzed - 0.5000 50.00%
Carcinogenicity (binary) - 1.0000 100.00%
Carcinogenicity (trinary) Non-required 0.5046 50.46%
Eye corrosion - 0.9918 99.18%
Eye irritation - 0.9666 96.66%
Skin irritation + 0.5084 50.84%
Skin corrosion - 0.9391 93.91%
Ames mutagenesis - 0.7200 72.00%
Human Ether-a-go-go-Related Gene inhibition - 0.3778 37.78%
Micronuclear - 0.8100 81.00%
Hepatotoxicity + 0.5934 59.34%
skin sensitisation - 0.8808 88.08%
Respiratory toxicity + 0.8778 87.78%
Reproductive toxicity + 0.9556 95.56%
Mitochondrial toxicity + 0.8625 86.25%
Nephrotoxicity - 0.6020 60.20%
Acute Oral Toxicity (c) III 0.4449 44.49%
Estrogen receptor binding + 0.9100 91.00%
Androgen receptor binding + 0.8270 82.70%
Thyroid receptor binding + 0.6946 69.46%
Glucocorticoid receptor binding + 0.8862 88.62%
Aromatase binding + 0.7354 73.54%
PPAR gamma - 0.5585 55.85%
Honey bee toxicity - 0.7898 78.98%
Biodegradation - 0.8500 85.00%
Crustacea aquatic toxicity + 0.5500 55.00%
Fish aquatic toxicity + 0.9930 99.30%

Targets

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Proven Targets:

CHEMBL ID UniProt ID Name Min activity Assay type Source
No proven targets yet!

Predicted Targets (via Super-PRED):

CHEMBL ID UniProt ID Name Probability Model accuracy
CHEMBL1994 P08235 Mineralocorticoid receptor 95.48% 100.00%
CHEMBL5619 P27695 DNA-(apurinic or apyrimidinic site) lyase 94.89% 91.11%
CHEMBL3251 P19838 Nuclear factor NF-kappa-B p105 subunit 94.65% 96.09%
CHEMBL253 P34972 Cannabinoid CB2 receptor 93.39% 97.25%
CHEMBL2581 P07339 Cathepsin D 91.04% 98.95%
CHEMBL4026 P40763 Signal transducer and activator of transcription 3 90.50% 82.69%
CHEMBL4303 P08238 Heat shock protein HSP 90-beta 89.62% 96.77%
CHEMBL3108638 O15164 Transcription intermediary factor 1-alpha 88.70% 95.56%
CHEMBL4203 Q9HAZ1 Dual specificity protein kinase CLK4 88.33% 94.45%
CHEMBL5608 Q16288 NT-3 growth factor receptor 86.91% 95.89%
CHEMBL3137262 O60341 LSD1/CoREST complex 86.58% 97.09%
CHEMBL1293249 Q13887 Kruppel-like factor 5 86.08% 86.33%
CHEMBL3351 Q13085 Acetyl-CoA carboxylase 1 85.77% 93.04%
CHEMBL1871 P10275 Androgen Receptor 84.22% 96.43%
CHEMBL226 P30542 Adenosine A1 receptor 83.64% 95.93%
CHEMBL5845 P23415 Glycine receptor subunit alpha-1 83.46% 90.71%
CHEMBL4261 Q16665 Hypoxia-inducible factor 1 alpha 80.81% 85.14%
CHEMBL1806 P11388 DNA topoisomerase II alpha 80.35% 89.00%

Plants that contains it

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Below are displayed all the plants proven (via scientific papers) to contain this compound!
To see more specific details click the taxa you are interested in.
Anemone narcissiflora
Asclepias curassavica
Gomphocarpus sinaicus
Hyperbaena columbica
Periploca sepium
Viburnum lantanoides

Cross-Links

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PubChem 12302371
NPASS NPC208239
LOTUS LTS0153484
wikiData Q76422743